Cluster: B43.CMAG_3_CGC33
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: B43.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B43_contig_1353 | B43_contig_1353_1951 | 2131171 | 2132076 | + | 3.A.1.126.1 |
| pfam | B43_contig_1353 | B43_contig_1353_1952 | 2132069 | 2132914 | + | ABC2_membrane_2 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1953 | 2132938 | 2134098 | + | GT28 |
| TC | B43_contig_1353 | B43_contig_1353_1954 | 2134262 | 2135299 | + | 4.D.2.1.7 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1955 | 2135341 | 2136333 | + | GT2 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1956 | 2136326 | 2137303 | + | GT2 |
| pfam | B43_contig_1353 | B43_contig_1353_1957 | 2137317 | 2138429 | + | LPG_synthase_TM |
| TC | B43_contig_1353 | B43_contig_1353_1958 | 2138639 | 2140012 | - | 2.A.25.1.9 |
| TC | B43_contig_1353 | B43_contig_1353_1959 | 2140127 | 2141869 | - | 3.A.1.135.5 |
| TC | B43_contig_1353 | B43_contig_1353_1960 | 2141866 | 2143605 | - | 3.A.1.135.5 |
Gene ID: B43_contig_1353_1951
Type: TC
Location: 2131171 - 2132076 (+)
Type: TC
Location: 2131171 - 2132076 (+)
Gene ID: B43_contig_1353_1952
Type: pfam
Location: 2132069 - 2132914 (+)
Type: pfam
Location: 2132069 - 2132914 (+)
Gene ID: B43_contig_1353_1953
Type: CAZyme
Location: 2132938 - 2134098 (+)
Type: CAZyme
Location: 2132938 - 2134098 (+)
Gene ID: B43_contig_1353_1954
Type: TC
Location: 2134262 - 2135299 (+)
Type: TC
Location: 2134262 - 2135299 (+)
Gene ID: B43_contig_1353_1955
Type: CAZyme
Location: 2135341 - 2136333 (+)
Type: CAZyme
Location: 2135341 - 2136333 (+)
Gene ID: B43_contig_1353_1956
Type: CAZyme
Location: 2136326 - 2137303 (+)
Type: CAZyme
Location: 2136326 - 2137303 (+)
Gene ID: B43_contig_1353_1957
Type: pfam
Location: 2137317 - 2138429 (+)
Type: pfam
Location: 2137317 - 2138429 (+)
Gene ID: B43_contig_1353_1958
Type: TC
Location: 2138639 - 2140012 (-)
Type: TC
Location: 2138639 - 2140012 (-)
Gene ID: B43_contig_1353_1959
Type: TC
Location: 2140127 - 2141869 (-)
Type: TC
Location: 2140127 - 2141869 (-)
Gene ID: B43_contig_1353_1960
Type: TC
Location: 2141866 - 2143605 (-)
Type: TC
Location: 2141866 - 2143605 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.