Cluster: B43.CMAG_3_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: B43.CMAG_3
- CGC Family ID: CGCFAM_07507
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B43_contig_1353 | B43_contig_1353_1134 | 1288887 | 1290749 | + | 3.A.3.6.10 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1135 | 1290929 | 1292485 | - | GH13_44 |
| NULL(UNKNOWN) | B43_contig_1353 | B43_contig_1353_1136 | 1292904 | 1293257 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B43_contig_1353 | B43_contig_1353_1137 | 1293471 | 1294238 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | B43_contig_1353 | B43_contig_1353_1138 | 1294238 | 1295143 | - | 3.A.1.131.1 |
Gene ID: B43_contig_1353_1134
Type: TC
Location: 1288887 - 1290749 (+)
Type: TC
Location: 1288887 - 1290749 (+)
Gene ID: B43_contig_1353_1135
Type: CAZyme
Location: 1290929 - 1292485 (-)
Type: CAZyme
Location: 1290929 - 1292485 (-)
Gene ID: B43_contig_1353_1136
Type:
Location: 1292904 - 1293257 (+)
Type:
Location: 1292904 - 1293257 (+)
Gene ID: B43_contig_1353_1137
Type: pfam
Location: 1293471 - 1294238 (-)
Type: pfam
Location: 1293471 - 1294238 (-)
Gene ID: B43_contig_1353_1138
Type: TC
Location: 1294238 - 1295143 (-)
Type: TC
Location: 1294238 - 1295143 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.