Cluster: B43.CMAG_3_CGC22
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: B43.CMAG_3
- CGC Family ID: CGCFAM_07505
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B43_contig_1353 | B43_contig_1353_1084 | 1228595 | 1229299 | - | 3.A.1.122.7 |
| pfam | B43_contig_1353 | B43_contig_1353_1085 | 1229454 | 1229945 | + | Acetyltransf_1 | FR47 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | B43_contig_1353 | B43_contig_1353_1086 | 1230107 | 1231315 | + | Fe_hyd_lg_C |
| TC | B43_contig_1353 | B43_contig_1353_1087 | 1231625 | 1232389 | - | 3.A.1.3.24 |
| TC | B43_contig_1353 | B43_contig_1353_1088 | 1232403 | 1233044 | - | 3.A.1.3.20 |
| TC | B43_contig_1353 | B43_contig_1353_1089 | 1233098 | 1233979 | - | 3.A.1.3.16 |
| STP | B43_contig_1353 | B43_contig_1353_1090 | 1234270 | 1235421 | - | Pribosyltran |
| TC | B43_contig_1353 | B43_contig_1353_1091 | 1236165 | 1237055 | + | 3.A.1.1.36 |
| TC | B43_contig_1353 | B43_contig_1353_1092 | 1237069 | 1237902 | + | 3.A.1.1.41 |
| STP | B43_contig_1353 | B43_contig_1353_1093 | 1238054 | 1239436 | + | SBP_bac_1 |
| pfam | B43_contig_1353 | B43_contig_1353_1094 | 1239527 | 1240402 | + | AP_endonuc_2 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1095 | 1240720 | 1241853 | + | GH179 |
Gene ID: B43_contig_1353_1084
Type: TC
Location: 1228595 - 1229299 (-)
Type: TC
Location: 1228595 - 1229299 (-)
Gene ID: B43_contig_1353_1085
Type: pfam
Location: 1229454 - 1229945 (+)
Type: pfam
Location: 1229454 - 1229945 (+)
Gene ID: B43_contig_1353_1086
Type: pfam
Location: 1230107 - 1231315 (+)
Type: pfam
Location: 1230107 - 1231315 (+)
Gene ID: B43_contig_1353_1087
Type: TC
Location: 1231625 - 1232389 (-)
Type: TC
Location: 1231625 - 1232389 (-)
Gene ID: B43_contig_1353_1088
Type: TC
Location: 1232403 - 1233044 (-)
Type: TC
Location: 1232403 - 1233044 (-)
Gene ID: B43_contig_1353_1089
Type: TC
Location: 1233098 - 1233979 (-)
Type: TC
Location: 1233098 - 1233979 (-)
Gene ID: B43_contig_1353_1090
Type: STP
Location: 1234270 - 1235421 (-)
Type: STP
Location: 1234270 - 1235421 (-)
Gene ID: B43_contig_1353_1091
Type: TC
Location: 1236165 - 1237055 (+)
Type: TC
Location: 1236165 - 1237055 (+)
Gene ID: B43_contig_1353_1092
Type: TC
Location: 1237069 - 1237902 (+)
Type: TC
Location: 1237069 - 1237902 (+)
Gene ID: B43_contig_1353_1093
Type: STP
Location: 1238054 - 1239436 (+)
Type: STP
Location: 1238054 - 1239436 (+)
Gene ID: B43_contig_1353_1094
Type: pfam
Location: 1239527 - 1240402 (+)
Type: pfam
Location: 1239527 - 1240402 (+)
Gene ID: B43_contig_1353_1095
Type: CAZyme
Location: 1240720 - 1241853 (+)
Type: CAZyme
Location: 1240720 - 1241853 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B43_contig_1353_1088 | vegan > omnivore | 1.62113 | 0.01451 |
| B43_contig_1353_1088 | vegetarian > omnivore | 1.55040 | 0.02538 |