Cluster: B43.CMAG_3_CGC20
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: B43.CMAG_3
- CGC Family ID: CGCFAM_04951
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B43_contig_1353 | B43_contig_1353_1057 | 1171950 | 1177625 | + | GH39 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1058 | 1178394 | 1183019 | + | GH141 |
| TC | B43_contig_1353 | B43_contig_1353_1059 | 1183035 | 1184357 | + | 3.A.1.1.28 |
| TC | B43_contig_1353 | B43_contig_1353_1060 | 1184443 | 1185303 | + | 3.A.1.1.42 |
| TC | B43_contig_1353 | B43_contig_1353_1061 | 1185305 | 1186141 | + | 3.A.1.1.42 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1062 | 1186149 | 1188251 | + | GH36 |
| TC | B43_contig_1353 | B43_contig_1353_1063 | 1188298 | 1190097 | + | 8.A.59.2.1 |
| TF | B43_contig_1353 | B43_contig_1353_1064 | 1190076 | 1191671 | + | HTH_AraC |
| CAZyme | B43_contig_1353 | B43_contig_1353_1065 | 1192519 | 1197936 | + | GH141 |
| CAZyme | B43_contig_1353 | B43_contig_1353_1066 | 1198044 | 1203695 | + | GH141 |
Gene ID: B43_contig_1353_1057
Type: CAZyme
Location: 1171950 - 1177625 (+)
Type: CAZyme
Location: 1171950 - 1177625 (+)
Gene ID: B43_contig_1353_1058
Type: CAZyme
Location: 1178394 - 1183019 (+)
Type: CAZyme
Location: 1178394 - 1183019 (+)
Gene ID: B43_contig_1353_1059
Type: TC
Location: 1183035 - 1184357 (+)
Type: TC
Location: 1183035 - 1184357 (+)
Gene ID: B43_contig_1353_1060
Type: TC
Location: 1184443 - 1185303 (+)
Type: TC
Location: 1184443 - 1185303 (+)
Gene ID: B43_contig_1353_1061
Type: TC
Location: 1185305 - 1186141 (+)
Type: TC
Location: 1185305 - 1186141 (+)
Gene ID: B43_contig_1353_1062
Type: CAZyme
Location: 1186149 - 1188251 (+)
Type: CAZyme
Location: 1186149 - 1188251 (+)
Gene ID: B43_contig_1353_1063
Type: TC
Location: 1188298 - 1190097 (+)
Type: TC
Location: 1188298 - 1190097 (+)
Gene ID: B43_contig_1353_1064
Type: TF
Location: 1190076 - 1191671 (+)
Type: TF
Location: 1190076 - 1191671 (+)
Gene ID: B43_contig_1353_1065
Type: CAZyme
Location: 1192519 - 1197936 (+)
Type: CAZyme
Location: 1192519 - 1197936 (+)
Gene ID: B43_contig_1353_1066
Type: CAZyme
Location: 1198044 - 1203695 (+)
Type: CAZyme
Location: 1198044 - 1203695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_A
Species
Clostridium_A leptum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.