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Cluster: B43.CMAG_3_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B43_contig_1353 B43_contig_1353_669 757493 758542 + GH179
TC B43_contig_1353 B43_contig_1353_670 758673 760445 + 8.A.59.2.1
TF B43_contig_1353 B43_contig_1353_671 760438 762024 + HTH_AraC | HTH_AraC
TC B43_contig_1353 B43_contig_1353_672 762269 763555 + 3.A.1.1.11
TC B43_contig_1353 B43_contig_1353_673 763643 764563 + 3.A.1.1.37
TC B43_contig_1353 B43_contig_1353_674 764564 765385 + 3.A.1.1.34
CAZyme B43_contig_1353 B43_contig_1353_675 765462 766559 + GH179
pfam B43_contig_1353 B43_contig_1353_676 766600 767724 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
pfam B43_contig_1353 B43_contig_1353_677 767751 768638 + AP_endonuc_2
CAZyme B43_contig_1353 B43_contig_1353_678 768756 769883 + GH179
Gene ID: B43_contig_1353_669
Type: CAZyme
Location: 757493 - 758542 (+)
Gene ID: B43_contig_1353_670
Type: TC
Location: 758673 - 760445 (+)
Gene ID: B43_contig_1353_671
Type: TF
Location: 760438 - 762024 (+)
Gene ID: B43_contig_1353_672
Type: TC
Location: 762269 - 763555 (+)
Gene ID: B43_contig_1353_673
Type: TC
Location: 763643 - 764563 (+)
Gene ID: B43_contig_1353_674
Type: TC
Location: 764564 - 765385 (+)
Gene ID: B43_contig_1353_675
Type: CAZyme
Location: 765462 - 766559 (+)
Gene ID: B43_contig_1353_676
Type: pfam
Location: 766600 - 767724 (+)
Gene ID: B43_contig_1353_677
Type: pfam
Location: 767751 - 768638 (+)
Gene ID: B43_contig_1353_678
Type: CAZyme
Location: 768756 - 769883 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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