Cluster: B41.bin_4_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: B41.bin_4
- CGC Family ID: CGCFAM_04945
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_306 | B41_contig_306_216 | 212645 | 213325 | + | 3.A.1.3.20 |
| TC | B41_contig_306 | B41_contig_306_217 | 213315 | 214061 | + | 3.A.1.3.25 |
| pfam | B41_contig_306 | B41_contig_306_218 | 214105 | 215136 | + | OCD_Mu_crystall |
| TC | B41_contig_306 | B41_contig_306_219 | 215158 | 216015 | + | 3.A.1.3.27 |
| CAZyme | B41_contig_306 | B41_contig_306_220 | 216088 | 216705 | + | CE4 |
| pfam | B41_contig_306 | B41_contig_306_221 | 217335 | 218549 | + | SLH | Flg_new_2 |
| pfam | B41_contig_306 | B41_contig_306_222 | 218560 | 218907 | + | SLH | SLH |
| TC | B41_contig_306 | B41_contig_306_223 | 219219 | 220712 | - | 2.A.25.1.9 |
Gene ID: B41_contig_306_216
Type: TC
Location: 212645 - 213325 (+)
Type: TC
Location: 212645 - 213325 (+)
Gene ID: B41_contig_306_217
Type: TC
Location: 213315 - 214061 (+)
Type: TC
Location: 213315 - 214061 (+)
Gene ID: B41_contig_306_218
Type: pfam
Location: 214105 - 215136 (+)
Type: pfam
Location: 214105 - 215136 (+)
Gene ID: B41_contig_306_219
Type: TC
Location: 215158 - 216015 (+)
Type: TC
Location: 215158 - 216015 (+)
Gene ID: B41_contig_306_220
Type: CAZyme
Location: 216088 - 216705 (+)
Type: CAZyme
Location: 216088 - 216705 (+)
Gene ID: B41_contig_306_221
Type: pfam
Location: 217335 - 218549 (+)
Type: pfam
Location: 217335 - 218549 (+)
Gene ID: B41_contig_306_222
Type: pfam
Location: 218560 - 218907 (+)
Type: pfam
Location: 218560 - 218907 (+)
Gene ID: B41_contig_306_223
Type: TC
Location: 219219 - 220712 (-)
Type: TC
Location: 219219 - 220712 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola fusiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_306_216 | vegetarian > vegan | 2.32523 | 0.00015 |
| B41_contig_306_217 | vegetarian > vegan | 1.33155 | 0.00015 |
| B41_contig_306_218 | vegetarian > vegan | 2.42021 | 0.00015 |
| B41_contig_306_219 | vegetarian > vegan | 2.72652 | 0.00015 |
| B41_contig_306_220 | vegetarian > vegan | 1.81765 | 0.00015 |
| B41_contig_306_222 | vegetarian > omnivore | 1.79004 | 0.00363 |
| B41_contig_306_222 | vegetarian > vegan | 1.80049 | 0.00015 |