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Cluster: B41.bin_4_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B41_contig_306 B41_contig_306_171 165364 166215 + 3.A.1.8.1
TC B41_contig_306 B41_contig_306_172 166478 167170 + 3.A.1.8.2
TC B41_contig_306 B41_contig_306_173 167167 168195 + 3.A.1.6.8
CAZyme B41_contig_306 B41_contig_306_174 168334 169821 - GH77
TC B41_contig_306 B41_contig_306_175 169861 170718 - 3.A.1.1.45
TC B41_contig_306 B41_contig_306_176 170718 171632 - 3.A.1.1.45
TC B41_contig_306 B41_contig_306_177 171789 173114 - 3.A.1.1.45
Gene ID: B41_contig_306_171
Type: TC
Location: 165364 - 166215 (+)
Gene ID: B41_contig_306_172
Type: TC
Location: 166478 - 167170 (+)
Gene ID: B41_contig_306_173
Type: TC
Location: 167167 - 168195 (+)
Gene ID: B41_contig_306_174
Type: CAZyme
Location: 168334 - 169821 (-)
Gene ID: B41_contig_306_175
Type: TC
Location: 169861 - 170718 (-)
Gene ID: B41_contig_306_176
Type: TC
Location: 170718 - 171632 (-)
Gene ID: B41_contig_306_177
Type: TC
Location: 171789 - 173114 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B41_contig_306_171 vegetarian > vegan 1.26476 0.00015
B41_contig_306_172 vegetarian > vegan 1.18590 0.00015
B41_contig_306_173 vegetarian > vegan 1.77343 0.00015
B41_contig_306_174 vegetarian > vegan 1.42114 0.00015
B41_contig_306_175 vegetarian > vegan 1.09206 0.00015
B41_contig_306_177 vegetarian > vegan 1.59745 0.00015

🧭 Explore Read Mapping of CGC

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