Cluster: B41.bin_4_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B41.bin_4
- CGC Family ID: CGCFAM_03071
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_306 | B41_contig_306_171 | 165364 | 166215 | + | 3.A.1.8.1 |
| TC | B41_contig_306 | B41_contig_306_172 | 166478 | 167170 | + | 3.A.1.8.2 |
| TC | B41_contig_306 | B41_contig_306_173 | 167167 | 168195 | + | 3.A.1.6.8 |
| CAZyme | B41_contig_306 | B41_contig_306_174 | 168334 | 169821 | - | GH77 |
| TC | B41_contig_306 | B41_contig_306_175 | 169861 | 170718 | - | 3.A.1.1.45 |
| TC | B41_contig_306 | B41_contig_306_176 | 170718 | 171632 | - | 3.A.1.1.45 |
| TC | B41_contig_306 | B41_contig_306_177 | 171789 | 173114 | - | 3.A.1.1.45 |
Gene ID: B41_contig_306_171
Type: TC
Location: 165364 - 166215 (+)
Type: TC
Location: 165364 - 166215 (+)
Gene ID: B41_contig_306_172
Type: TC
Location: 166478 - 167170 (+)
Type: TC
Location: 166478 - 167170 (+)
Gene ID: B41_contig_306_173
Type: TC
Location: 167167 - 168195 (+)
Type: TC
Location: 167167 - 168195 (+)
Gene ID: B41_contig_306_174
Type: CAZyme
Location: 168334 - 169821 (-)
Type: CAZyme
Location: 168334 - 169821 (-)
Gene ID: B41_contig_306_175
Type: TC
Location: 169861 - 170718 (-)
Type: TC
Location: 169861 - 170718 (-)
Gene ID: B41_contig_306_176
Type: TC
Location: 170718 - 171632 (-)
Type: TC
Location: 170718 - 171632 (-)
Gene ID: B41_contig_306_177
Type: TC
Location: 171789 - 173114 (-)
Type: TC
Location: 171789 - 173114 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola fusiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_306_171 | vegetarian > vegan | 1.26476 | 0.00015 |
| B41_contig_306_172 | vegetarian > vegan | 1.18590 | 0.00015 |
| B41_contig_306_173 | vegetarian > vegan | 1.77343 | 0.00015 |
| B41_contig_306_174 | vegetarian > vegan | 1.42114 | 0.00015 |
| B41_contig_306_175 | vegetarian > vegan | 1.09206 | 0.00015 |
| B41_contig_306_177 | vegetarian > vegan | 1.59745 | 0.00015 |