Cluster: B41.bin_4_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: B41.bin_4
- CGC Family ID: CGCFAM_07498
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_306 | B41_contig_306_59 | 59880 | 61217 | + | 2.A.1.2.88 |
| pfam | B41_contig_306 | B41_contig_306_60 | 61242 | 62066 | + | GDPD |
| NULL(UNKNOWN) | B41_contig_306 | B41_contig_306_61 | 62134 | 63012 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B41_contig_306 | B41_contig_306_62 | 63005 | 64735 | + | 4.C.1.1.4 |
| CAZyme | B41_contig_306 | B41_contig_306_63 | 64860 | 66038 | - | GT1 |
Gene ID: B41_contig_306_59
Type: TC
Location: 59880 - 61217 (+)
Type: TC
Location: 59880 - 61217 (+)
Gene ID: B41_contig_306_60
Type: pfam
Location: 61242 - 62066 (+)
Type: pfam
Location: 61242 - 62066 (+)
Gene ID: B41_contig_306_61
Type:
Location: 62134 - 63012 (+)
Type:
Location: 62134 - 63012 (+)
Gene ID: B41_contig_306_62
Type: TC
Location: 63005 - 64735 (+)
Type: TC
Location: 63005 - 64735 (+)
Gene ID: B41_contig_306_63
Type: CAZyme
Location: 64860 - 66038 (-)
Type: CAZyme
Location: 64860 - 66038 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola fusiformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_306_59 | vegetarian > vegan | 1.50377 | 0.00015 |
| B41_contig_306_60 | vegetarian > vegan | 2.40743 | 0.00015 |
| B41_contig_306_61 | vegetarian > vegan | 1.88673 | 0.00015 |
| B41_contig_306_62 | vegetarian > vegan | 1.43671 | 0.00015 |
| B41_contig_306_63 | vegetarian > vegan | 2.60600 | 0.00015 |