Cluster: B41.CMAG_1_CGC9
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_07092
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_816 | 847803 | 849608 | + | 2.A.58.2.2 |
| CAZyme | B41_contig_96 | B41_contig_96_817 | 849859 | 851826 | + | CE3 |
| CAZyme | B41_contig_96 | B41_contig_96_818 | 852039 | 854246 | + | CBM22 | GH30_8 |
| TC | B41_contig_96 | B41_contig_96_819 | 854368 | 854847 | + | 9.A.24.1.7 |
| pfam | B41_contig_96 | B41_contig_96_820 | 855702 | 856037 | + | SpoIIID |
| TC | B41_contig_96 | B41_contig_96_821 | 856277 | 857944 | - | 3.A.1.5.41 |
| pfam | B41_contig_96 | B41_contig_96_822 | 858131 | 861280 | - | Dockerin_1 |
| TC | B41_contig_96 | B41_contig_96_823 | 861481 | 862686 | + | 2.A.4.7.6 |
Gene ID: B41_contig_96_816
Type: TC
Location: 847803 - 849608 (+)
Type: TC
Location: 847803 - 849608 (+)
Gene ID: B41_contig_96_817
Type: CAZyme
Location: 849859 - 851826 (+)
Type: CAZyme
Location: 849859 - 851826 (+)
Gene ID: B41_contig_96_818
Type: CAZyme
Location: 852039 - 854246 (+)
Type: CAZyme
Location: 852039 - 854246 (+)
Gene ID: B41_contig_96_819
Type: TC
Location: 854368 - 854847 (+)
Type: TC
Location: 854368 - 854847 (+)
Gene ID: B41_contig_96_820
Type: pfam
Location: 855702 - 856037 (+)
Type: pfam
Location: 855702 - 856037 (+)
Gene ID: B41_contig_96_821
Type: TC
Location: 856277 - 857944 (-)
Type: TC
Location: 856277 - 857944 (-)
Gene ID: B41_contig_96_822
Type: pfam
Location: 858131 - 861280 (-)
Type: pfam
Location: 858131 - 861280 (-)
Gene ID: B41_contig_96_823
Type: TC
Location: 861481 - 862686 (+)
Type: TC
Location: 861481 - 862686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_96_816 | vegan > omnivore | 1.02400 | 0.00302 |