Cluster: B41.CMAG_1_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_03247
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_474 | 513105 | 513968 | - | 2.A.7.2.2 |
| TF | B41_contig_96 | B41_contig_96_475 | 513983 | 514669 | - | Trans_reg_C |
| STP | B41_contig_96 | B41_contig_96_476 | 514666 | 516102 | - | HATPase_c | HisKA |
| TC | B41_contig_96 | B41_contig_96_477 | 516152 | 518428 | - | 3.A.3.23.2 |
| TF | B41_contig_96 | B41_contig_96_478 | 518642 | 519520 | - | HTH_AraC | HTH_AraC |
| CAZyme | B41_contig_96 | B41_contig_96_479 | 519653 | 521635 | + | GH31_1 |
Gene ID: B41_contig_96_474
Type: TC
Location: 513105 - 513968 (-)
Type: TC
Location: 513105 - 513968 (-)
Gene ID: B41_contig_96_475
Type: TF
Location: 513983 - 514669 (-)
Type: TF
Location: 513983 - 514669 (-)
Gene ID: B41_contig_96_476
Type: STP
Location: 514666 - 516102 (-)
Type: STP
Location: 514666 - 516102 (-)
Gene ID: B41_contig_96_477
Type: TC
Location: 516152 - 518428 (-)
Type: TC
Location: 516152 - 518428 (-)
Gene ID: B41_contig_96_478
Type: TF
Location: 518642 - 519520 (-)
Type: TF
Location: 518642 - 519520 (-)
Gene ID: B41_contig_96_479
Type: CAZyme
Location: 519653 - 521635 (+)
Type: CAZyme
Location: 519653 - 521635 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_96_479 | vegan > omnivore | 1.53613 | 0.00019 |
| B41_contig_96_479 | vegetarian > omnivore | 1.40215 | 0.03097 |