Cluster: B41.CMAG_1_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_04667
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B41_contig_96 | B41_contig_96_2376 | 2609622 | 2612063 | + | CBM3 | GH9 |
| NULL(UNKNOWN) | B41_contig_96 | B41_contig_96_2377 | 2612192 | 2612476 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B41_contig_96 | B41_contig_96_2378 | 2612501 | 2613931 | + | 3.A.24.3.1 |
| pfam | B41_contig_96 | B41_contig_96_2379 | 2614005 | 2615342 | - | NYN |
| TC | B41_contig_96 | B41_contig_96_2380 | 2615647 | 2617206 | + | 2.A.21.2.3 |
| TC | B41_contig_96 | B41_contig_96_2381 | 2617289 | 2617975 | - | 1.A.16.5.1 |
Gene ID: B41_contig_96_2376
Type: CAZyme
Location: 2609622 - 2612063 (+)
Type: CAZyme
Location: 2609622 - 2612063 (+)
Gene ID: B41_contig_96_2377
Type:
Location: 2612192 - 2612476 (+)
Type:
Location: 2612192 - 2612476 (+)
Gene ID: B41_contig_96_2378
Type: TC
Location: 2612501 - 2613931 (+)
Type: TC
Location: 2612501 - 2613931 (+)
Gene ID: B41_contig_96_2379
Type: pfam
Location: 2614005 - 2615342 (-)
Type: pfam
Location: 2614005 - 2615342 (-)
Gene ID: B41_contig_96_2380
Type: TC
Location: 2615647 - 2617206 (+)
Type: TC
Location: 2615647 - 2617206 (+)
Gene ID: B41_contig_96_2381
Type: TC
Location: 2617289 - 2617975 (-)
Type: TC
Location: 2617289 - 2617975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.