Cluster: B41.CMAG_1_CGC32
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_07098
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_2311 | 2538485 | 2540275 | - | 3.A.1.120.6 |
| TF | B41_contig_96 | B41_contig_96_2312 | 2540272 | 2541321 | - | LacI |
| CAZyme | B41_contig_96 | B41_contig_96_2313 | 2541718 | 2544447 | + | CBM23 | GH5_7 |
| CAZyme | B41_contig_96 | B41_contig_96_2314 | 2544475 | 2546388 | + | CBM23 | GH5_7 |
Gene ID: B41_contig_96_2311
Type: TC
Location: 2538485 - 2540275 (-)
Type: TC
Location: 2538485 - 2540275 (-)
Gene ID: B41_contig_96_2312
Type: TF
Location: 2540272 - 2541321 (-)
Type: TF
Location: 2540272 - 2541321 (-)
Gene ID: B41_contig_96_2313
Type: CAZyme
Location: 2541718 - 2544447 (+)
Type: CAZyme
Location: 2541718 - 2544447 (+)
Gene ID: B41_contig_96_2314
Type: CAZyme
Location: 2544475 - 2546388 (+)
Type: CAZyme
Location: 2544475 - 2546388 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_96_2313 | vegan > omnivore | 1.12487 | 0.00019 |
| B41_contig_96_2313 | vegetarian > omnivore | 1.52697 | 0.01381 |