Cluster: B41.CMAG_1_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_07093
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_457 | 491499 | 492248 | - | 3.A.1.3.2 |
| TF | B41_contig_96 | B41_contig_96_458 | 492245 | 492667 | - | Rrf2 |
| CAZyme | B41_contig_96 | B41_contig_96_459 | 492883 | 494304 | - | GT5 |
| pfam | B41_contig_96 | B41_contig_96_460 | 494425 | 495549 | - | NTP_transferase | Hexapep_GlmU |
| pfam | B41_contig_96 | B41_contig_96_461 | 495564 | 496766 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | B41_contig_96 | B41_contig_96_462 | 496844 | 498835 | - | CBM48 | GH13_9 |
| STP | B41_contig_96 | B41_contig_96_463 | 499028 | 501271 | - | SpoIIE |
| TC | B41_contig_96 | B41_contig_96_464 | 501492 | 502256 | - | 3.A.1.3.23 |
| TC | B41_contig_96 | B41_contig_96_465 | 502270 | 502923 | - | 3.A.1.3.14 |
| TC | B41_contig_96 | B41_contig_96_466 | 502946 | 503761 | - | 3.A.1.3.1 |
Gene ID: B41_contig_96_457
Type: TC
Location: 491499 - 492248 (-)
Type: TC
Location: 491499 - 492248 (-)
Gene ID: B41_contig_96_458
Type: TF
Location: 492245 - 492667 (-)
Type: TF
Location: 492245 - 492667 (-)
Gene ID: B41_contig_96_459
Type: CAZyme
Location: 492883 - 494304 (-)
Type: CAZyme
Location: 492883 - 494304 (-)
Gene ID: B41_contig_96_460
Type: pfam
Location: 494425 - 495549 (-)
Type: pfam
Location: 494425 - 495549 (-)
Gene ID: B41_contig_96_461
Type: pfam
Location: 495564 - 496766 (-)
Type: pfam
Location: 495564 - 496766 (-)
Gene ID: B41_contig_96_462
Type: CAZyme
Location: 496844 - 498835 (-)
Type: CAZyme
Location: 496844 - 498835 (-)
Gene ID: B41_contig_96_463
Type: STP
Location: 499028 - 501271 (-)
Type: STP
Location: 499028 - 501271 (-)
Gene ID: B41_contig_96_464
Type: TC
Location: 501492 - 502256 (-)
Type: TC
Location: 501492 - 502256 (-)
Gene ID: B41_contig_96_465
Type: TC
Location: 502270 - 502923 (-)
Type: TC
Location: 502270 - 502923 (-)
Gene ID: B41_contig_96_466
Type: TC
Location: 502946 - 503761 (-)
Type: TC
Location: 502946 - 503761 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_96_457 | vegan > omnivore | 3.58024 | 0.00019 |
| B41_contig_96_457 | vegetarian > omnivore | 3.45901 | 0.00581 |
| B41_contig_96_461 | vegan > omnivore | 2.55230 | 0.00019 |
| B41_contig_96_461 | vegetarian > omnivore | 1.74260 | 0.00581 |