Cluster: B41.CMAG_1_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_03245
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_2010 | 2224575 | 2226293 | - | 1.A.11.2.7 |
| TC | B41_contig_96 | B41_contig_96_2011 | 2226558 | 2227394 | - | 3.A.1.132.3 |
| pfam | B41_contig_96 | B41_contig_96_2012 | 2227458 | 2228987 | - | PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| CAZyme | B41_contig_96 | B41_contig_96_2013 | 2229195 | 2230982 | + | GH5_1 |
| CAZyme | B41_contig_96 | B41_contig_96_2014 | 2231186 | 2232982 | + | GH5_1 |
| pfam | B41_contig_96 | B41_contig_96_2015 | 2233016 | 2233495 | + | dCMP_cyt_deam_1 | MafB19-deam |
| pfam | B41_contig_96 | B41_contig_96_2016 | 2233845 | 2234522 | + | Methyltransf_4 | Methyltransf_25 |
| CAZyme | B41_contig_96 | B41_contig_96_2017 | 2234557 | 2237985 | + | GH59 |
Gene ID: B41_contig_96_2010
Type: TC
Location: 2224575 - 2226293 (-)
Type: TC
Location: 2224575 - 2226293 (-)
Gene ID: B41_contig_96_2011
Type: TC
Location: 2226558 - 2227394 (-)
Type: TC
Location: 2226558 - 2227394 (-)
Gene ID: B41_contig_96_2012
Type: pfam
Location: 2227458 - 2228987 (-)
Type: pfam
Location: 2227458 - 2228987 (-)
Gene ID: B41_contig_96_2013
Type: CAZyme
Location: 2229195 - 2230982 (+)
Type: CAZyme
Location: 2229195 - 2230982 (+)
Gene ID: B41_contig_96_2014
Type: CAZyme
Location: 2231186 - 2232982 (+)
Type: CAZyme
Location: 2231186 - 2232982 (+)
Gene ID: B41_contig_96_2015
Type: pfam
Location: 2233016 - 2233495 (+)
Type: pfam
Location: 2233016 - 2233495 (+)
Gene ID: B41_contig_96_2016
Type: pfam
Location: 2233845 - 2234522 (+)
Type: pfam
Location: 2233845 - 2234522 (+)
Gene ID: B41_contig_96_2017
Type: CAZyme
Location: 2234557 - 2237985 (+)
Type: CAZyme
Location: 2234557 - 2237985 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_96_2013 | vegan > omnivore | 1.00358 | 0.00302 |
| B41_contig_96_2015 | vegan > omnivore | 1.94062 | 0.00019 |
| B41_contig_96_2016 | vegan > omnivore | 1.44524 | 0.00019 |