Cluster: B41.CMAG_1_CGC21
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_04666
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_1747 | 1935937 | 1936644 | - | 1.A.8.13.3 |
| CAZyme | B41_contig_96 | B41_contig_96_1748 | 1937088 | 1939007 | - | GH13_9 |
| STP | B41_contig_96 | B41_contig_96_1749 | 1939245 | 1939823 | + | TetR_N |
| pfam | B41_contig_96 | B41_contig_96_1750 | 1940020 | 1940883 | + | F_bP_aldolase |
| TC | B41_contig_96 | B41_contig_96_1751 | 1941147 | 1942169 | + | 3.A.1.121.4 |
| peptidase | B41_contig_96 | B41_contig_96_1752 | 1942531 | 1944102 | + | C26.957 |
| NULL(UNKNOWN) | B41_contig_96 | B41_contig_96_1753 | 1944158 | 1946413 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B41_contig_96 | B41_contig_96_1754 | 1946425 | 1947390 | + | GT2 |
| pfam | B41_contig_96 | B41_contig_96_1755 | 1947588 | 1948076 | + | NfeD |
| TC | B41_contig_96 | B41_contig_96_1756 | 1948101 | 1949129 | + | 8.A.21.2.2 |
| TC | B41_contig_96 | B41_contig_96_1757 | 1949516 | 1950919 | + | 2.A.50.2.1 |
Gene ID: B41_contig_96_1747
Type: TC
Location: 1935937 - 1936644 (-)
Type: TC
Location: 1935937 - 1936644 (-)
Gene ID: B41_contig_96_1748
Type: CAZyme
Location: 1937088 - 1939007 (-)
Type: CAZyme
Location: 1937088 - 1939007 (-)
Gene ID: B41_contig_96_1749
Type: STP
Location: 1939245 - 1939823 (+)
Type: STP
Location: 1939245 - 1939823 (+)
Gene ID: B41_contig_96_1750
Type: pfam
Location: 1940020 - 1940883 (+)
Type: pfam
Location: 1940020 - 1940883 (+)
Gene ID: B41_contig_96_1751
Type: TC
Location: 1941147 - 1942169 (+)
Type: TC
Location: 1941147 - 1942169 (+)
Gene ID: B41_contig_96_1752
Type: peptidase
Location: 1942531 - 1944102 (+)
Type: peptidase
Location: 1942531 - 1944102 (+)
Gene ID: B41_contig_96_1753
Type:
Location: 1944158 - 1946413 (+)
Type:
Location: 1944158 - 1946413 (+)
Gene ID: B41_contig_96_1754
Type: CAZyme
Location: 1946425 - 1947390 (+)
Type: CAZyme
Location: 1946425 - 1947390 (+)
Gene ID: B41_contig_96_1755
Type: pfam
Location: 1947588 - 1948076 (+)
Type: pfam
Location: 1947588 - 1948076 (+)
Gene ID: B41_contig_96_1756
Type: TC
Location: 1948101 - 1949129 (+)
Type: TC
Location: 1948101 - 1949129 (+)
Gene ID: B41_contig_96_1757
Type: TC
Location: 1949516 - 1950919 (+)
Type: TC
Location: 1949516 - 1950919 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B41_contig_96_1756 | vegan > omnivore | 1.81518 | 0.00019 |