Cluster: B41.CMAG_1_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: B41.CMAG_1
- CGC Family ID: CGCFAM_04663
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B41_contig_96 | B41_contig_96_1533 | 1701745 | 1704402 | - | 9.B.74.1.3 |
| TC | B41_contig_96 | B41_contig_96_1534 | 1705315 | 1707348 | - | 9.A.8.1.5 |
| TC | B41_contig_96 | B41_contig_96_1535 | 1707413 | 1707862 | - | 9.A.11.1.1 |
| TC | B41_contig_96 | B41_contig_96_1536 | 1707929 | 1708288 | - | 9.A.11.1.1 |
| TC | B41_contig_96 | B41_contig_96_1537 | 1708307 | 1709341 | - | 9.A.11.1.1 |
| STP | B41_contig_96 | B41_contig_96_1538 | 1710790 | 1711461 | + | Nitroreductase |
| CAZyme | B41_contig_96 | B41_contig_96_1539 | 1711539 | 1714058 | - | CBM76 | GH44 |
| TF | B41_contig_96 | B41_contig_96_1540 | 1714393 | 1714875 | + | MarR |
| TC | B41_contig_96 | B41_contig_96_1541 | 1714869 | 1716611 | + | 3.A.1.135.5 |
| TC | B41_contig_96 | B41_contig_96_1542 | 1716608 | 1718503 | + | 3.A.1.135.5 |
Gene ID: B41_contig_96_1533
Type: TC
Location: 1701745 - 1704402 (-)
Type: TC
Location: 1701745 - 1704402 (-)
Gene ID: B41_contig_96_1534
Type: TC
Location: 1705315 - 1707348 (-)
Type: TC
Location: 1705315 - 1707348 (-)
Gene ID: B41_contig_96_1535
Type: TC
Location: 1707413 - 1707862 (-)
Type: TC
Location: 1707413 - 1707862 (-)
Gene ID: B41_contig_96_1536
Type: TC
Location: 1707929 - 1708288 (-)
Type: TC
Location: 1707929 - 1708288 (-)
Gene ID: B41_contig_96_1537
Type: TC
Location: 1708307 - 1709341 (-)
Type: TC
Location: 1708307 - 1709341 (-)
Gene ID: B41_contig_96_1538
Type: STP
Location: 1710790 - 1711461 (+)
Type: STP
Location: 1710790 - 1711461 (+)
Gene ID: B41_contig_96_1539
Type: CAZyme
Location: 1711539 - 1714058 (-)
Type: CAZyme
Location: 1711539 - 1714058 (-)
Gene ID: B41_contig_96_1540
Type: TF
Location: 1714393 - 1714875 (+)
Type: TF
Location: 1714393 - 1714875 (+)
Gene ID: B41_contig_96_1541
Type: TC
Location: 1714869 - 1716611 (+)
Type: TC
Location: 1714869 - 1716611 (+)
Gene ID: B41_contig_96_1542
Type: TC
Location: 1716608 - 1718503 (+)
Type: TC
Location: 1716608 - 1718503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000433635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.