Cluster: B40.CMAG_7_CGC10
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: B40.CMAG_7
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B40_contig_4002 | B40_contig_4002_1562 | 1759635 | 1760957 | - | GT30 |
| TC | B40_contig_4002 | B40_contig_4002_1563 | 1760960 | 1762720 | - | 3.A.1.106.2 |
| CAZyme | B40_contig_4002 | B40_contig_4002_1564 | 1762717 | 1763856 | - | GT19 |
| pfam | B40_contig_4002 | B40_contig_4002_1565 | 1763860 | 1764672 | - | LpxI_C | LpxI_N |
| TC | B40_contig_4002 | B40_contig_4002_1566 | 1765070 | 1766320 | + | 2.A.23.4.1 |
| TC | B40_contig_4002 | B40_contig_4002_1567 | 1766591 | 1767805 | + | 2.A.23.4.1 |
| pfam | B40_contig_4002 | B40_contig_4002_1568 | 1768101 | 1768907 | - | rve | HTH_21 | rve_2 | rve_3 |
| NULL(UNKNOWN) | B40_contig_4002 | B40_contig_4002_1569 | 1769026 | 1769556 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B40_contig_4002 | B40_contig_4002_1570 | 1770033 | 1771253 | - | 2.A.23.4.1 |
| pfam | B40_contig_4002 | B40_contig_4002_1571 | 1771707 | 1773566 | + | Peptidase_S9 | Esterase | EstA_Ig_like |
| pfam | B40_contig_4002 | B40_contig_4002_1572 | 1773760 | 1774416 | - | RecO_N |
| TC | B40_contig_4002 | B40_contig_4002_1573 | 1774391 | 1775716 | - | 9.A.40.2.2 |
Gene ID: B40_contig_4002_1562
Type: CAZyme
Location: 1759635 - 1760957 (-)
Type: CAZyme
Location: 1759635 - 1760957 (-)
Gene ID: B40_contig_4002_1563
Type: TC
Location: 1760960 - 1762720 (-)
Type: TC
Location: 1760960 - 1762720 (-)
Gene ID: B40_contig_4002_1564
Type: CAZyme
Location: 1762717 - 1763856 (-)
Type: CAZyme
Location: 1762717 - 1763856 (-)
Gene ID: B40_contig_4002_1565
Type: pfam
Location: 1763860 - 1764672 (-)
Type: pfam
Location: 1763860 - 1764672 (-)
Gene ID: B40_contig_4002_1566
Type: TC
Location: 1765070 - 1766320 (+)
Type: TC
Location: 1765070 - 1766320 (+)
Gene ID: B40_contig_4002_1567
Type: TC
Location: 1766591 - 1767805 (+)
Type: TC
Location: 1766591 - 1767805 (+)
Gene ID: B40_contig_4002_1568
Type: pfam
Location: 1768101 - 1768907 (-)
Type: pfam
Location: 1768101 - 1768907 (-)
Gene ID: B40_contig_4002_1569
Type:
Location: 1769026 - 1769556 (-)
Type:
Location: 1769026 - 1769556 (-)
Gene ID: B40_contig_4002_1570
Type: TC
Location: 1770033 - 1771253 (-)
Type: TC
Location: 1770033 - 1771253 (-)
Gene ID: B40_contig_4002_1571
Type: pfam
Location: 1771707 - 1773566 (+)
Type: pfam
Location: 1771707 - 1773566 (+)
Gene ID: B40_contig_4002_1572
Type: pfam
Location: 1773760 - 1774416 (-)
Type: pfam
Location: 1773760 - 1774416 (-)
Gene ID: B40_contig_4002_1573
Type: TC
Location: 1774391 - 1775716 (-)
Type: TC
Location: 1774391 - 1775716 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Dialisteraceae
Genus
Allisonella
Species
Allisonella histaminiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.