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Cluster: B40.CMAG_2_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B40_contig_3331 B40_contig_3331_418 522501 523400 + 3.A.1.11.6
TC B40_contig_3331 B40_contig_3331_419 523397 524209 + 3.A.1.139.2
pfam B40_contig_3331 B40_contig_3331_420 524390 525994 + DUF87 | HerA_C
CAZyme B40_contig_3331 B40_contig_3331_421 526021 526890 + GH25
Gene ID: B40_contig_3331_418
Type: TC
Location: 522501 - 523400 (+)
Gene ID: B40_contig_3331_419
Type: TC
Location: 523397 - 524209 (+)
Gene ID: B40_contig_3331_420
Type: pfam
Location: 524390 - 525994 (+)
Gene ID: B40_contig_3331_421
Type: CAZyme
Location: 526021 - 526890 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B40_contig_3331_420 vegetarian > vegan 1.39627 0.02538

🧭 Explore Read Mapping of CGC

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