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Cluster: B38.bin_6_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B38_contig_1193 B38_contig_1193_908 1065342 1066418 + GT4
pfam B38_contig_1193 B38_contig_1193_909 1066497 1068071 + PDDEXK_9 | AAA-ATPase_like
pfam B38_contig_1193 B38_contig_1193_910 1068075 1068986 + Glycos_transf_2
CAZyme B38_contig_1193 B38_contig_1193_911 1068991 1070283 + GT4
CAZyme B38_contig_1193 B38_contig_1193_912 1070306 1071097 + GT2
CAZyme B38_contig_1193 B38_contig_1193_913 1071197 1072960 + CBM91 | GH43_10
pfam B38_contig_1193 B38_contig_1193_914 1072967 1074679 + FG-GAP_3 | FG-GAP_3 | FG-GAP_3
TC B38_contig_1193 B38_contig_1193_915 1074692 1075786 + 9.B.97.1.10
CAZyme B38_contig_1193 B38_contig_1193_916 1076118 1078532 - GH36
Gene ID: B38_contig_1193_908
Type: CAZyme
Location: 1065342 - 1066418 (+)
Gene ID: B38_contig_1193_909
Type: pfam
Location: 1066497 - 1068071 (+)
Gene ID: B38_contig_1193_910
Type: pfam
Location: 1068075 - 1068986 (+)
Gene ID: B38_contig_1193_911
Type: CAZyme
Location: 1068991 - 1070283 (+)
Gene ID: B38_contig_1193_912
Type: CAZyme
Location: 1070306 - 1071097 (+)
Gene ID: B38_contig_1193_913
Type: CAZyme
Location: 1071197 - 1072960 (+)
Gene ID: B38_contig_1193_914
Type: pfam
Location: 1072967 - 1074679 (+)
Gene ID: B38_contig_1193_915
Type: TC
Location: 1074692 - 1075786 (+)
Gene ID: B38_contig_1193_916
Type: CAZyme
Location: 1076118 - 1078532 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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