Cluster: B38.bin_6_CGC7
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: B38.bin_6
- CGC Family ID: CGCFAM_00901
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B38_contig_1193 | B38_contig_1193_791 | 921488 | 922708 | - | GT30 |
| pfam | B38_contig_1193 | B38_contig_1193_792 | 922705 | 924222 | - | tRNA-synt_1c | Anticodon_2 |
| STP | B38_contig_1193 | B38_contig_1193_793 | 924320 | 926383 | + | HD |
| TC | B38_contig_1193 | B38_contig_1193_794 | 926394 | 928871 | - | 3.A.11.3.1 |
| pfam | B38_contig_1193 | B38_contig_1193_795 | 928986 | 929624 | - | OMP_b-brl | OMP_b-brl_2 |
| pfam | B38_contig_1193 | B38_contig_1193_796 | 929715 | 930782 | - | GldN |
| TC | B38_contig_1193 | B38_contig_1193_797 | 930826 | 932367 | - | 9.A.25.1.1 |
| pfam | B38_contig_1193 | B38_contig_1193_798 | 932415 | 933350 | - | GldL_N |
| TC | B38_contig_1193 | B38_contig_1193_799 | 933372 | 934808 | - | 9.A.25.1.1 |
Gene ID: B38_contig_1193_791
Type: CAZyme
Location: 921488 - 922708 (-)
Type: CAZyme
Location: 921488 - 922708 (-)
Gene ID: B38_contig_1193_792
Type: pfam
Location: 922705 - 924222 (-)
Type: pfam
Location: 922705 - 924222 (-)
Gene ID: B38_contig_1193_793
Type: STP
Location: 924320 - 926383 (+)
Type: STP
Location: 924320 - 926383 (+)
Gene ID: B38_contig_1193_794
Type: TC
Location: 926394 - 928871 (-)
Type: TC
Location: 926394 - 928871 (-)
Gene ID: B38_contig_1193_795
Type: pfam
Location: 928986 - 929624 (-)
Type: pfam
Location: 928986 - 929624 (-)
Gene ID: B38_contig_1193_796
Type: pfam
Location: 929715 - 930782 (-)
Type: pfam
Location: 929715 - 930782 (-)
Gene ID: B38_contig_1193_797
Type: TC
Location: 930826 - 932367 (-)
Type: TC
Location: 930826 - 932367 (-)
Gene ID: B38_contig_1193_798
Type: pfam
Location: 932415 - 933350 (-)
Type: pfam
Location: 932415 - 933350 (-)
Gene ID: B38_contig_1193_799
Type: TC
Location: 933372 - 934808 (-)
Type: TC
Location: 933372 - 934808 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella xylaniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B38_contig_1193_793 | vegan > omnivore | 1.17619 | 0.01269 |
| B38_contig_1193_793 | vegetarian > omnivore | 1.11034 | 0.00672 |
| B38_contig_1193_794 | vegan > omnivore | 1.07835 | 0.01269 |
| B38_contig_1193_794 | vegetarian > omnivore | 1.00238 | 0.00672 |
| B38_contig_1193_795 | vegan > omnivore | 1.24118 | 0.01269 |
| B38_contig_1193_795 | vegetarian > omnivore | 1.22245 | 0.00672 |
| B38_contig_1193_796 | vegetarian > omnivore | 1.35234 | 0.00672 |
| B38_contig_1193_796 | vegan > omnivore | 1.22159 | 0.01269 |
| B38_contig_1193_797 | vegetarian > omnivore | 1.22429 | 0.00672 |
| B38_contig_1193_797 | vegan > omnivore | 1.08395 | 0.01269 |
| B38_contig_1193_798 | vegetarian > omnivore | 1.65031 | 0.00672 |
| B38_contig_1193_798 | vegan > omnivore | 1.49045 | 0.01269 |
| B38_contig_1193_799 | vegetarian > omnivore | 1.58327 | 0.00672 |
| B38_contig_1193_799 | vegan > omnivore | 1.32767 | 0.01269 |