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Cluster: B38.bin_6_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B38_contig_1193 B38_contig_1193_2715 3454563 3455516 + GH25
pfam B38_contig_1193 B38_contig_1193_2716 3455580 3456425 - Cons_hypoth95 | MTS | PrmA | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) B38_contig_1193 B38_contig_1193_2717 3456572 3457582 + NULL(UNKNOWN)
[View Structural Homologs]
TC B38_contig_1193 B38_contig_1193_2718 3457614 3459260 + 1.B.9.4.2
TC B38_contig_1193 B38_contig_1193_2719 3459632 3462406 + 1.B.14.6.1
pfam B38_contig_1193 B38_contig_1193_2720 3462418 3464052 + SusD_RagB | SusD-like_3
pfam B38_contig_1193 B38_contig_1193_2721 3464283 3464594 + RseC_MucC
TC B38_contig_1193 B38_contig_1193_2722 3464603 3465559 + 3.D.6.1.2
TC B38_contig_1193 B38_contig_1193_2723 3465592 3466935 + 3.D.6.1.2
TC B38_contig_1193 B38_contig_1193_2724 3466948 3467937 + 3.D.6.1.2
TC B38_contig_1193 B38_contig_1193_2725 3467934 3468563 + 3.D.6.1.2
TC B38_contig_1193 B38_contig_1193_2726 3468603 3469166 + 3.D.6.1.2
TC B38_contig_1193 B38_contig_1193_2727 3469186 3469797 + 3.D.6.1.2
Gene ID: B38_contig_1193_2715
Type: CAZyme
Location: 3454563 - 3455516 (+)
Gene ID: B38_contig_1193_2716
Type: pfam
Location: 3455580 - 3456425 (-)
Gene ID: B38_contig_1193_2717
Type:
Location: 3456572 - 3457582 (+)
Gene ID: B38_contig_1193_2718
Type: TC
Location: 3457614 - 3459260 (+)
Gene ID: B38_contig_1193_2719
Type: TC
Location: 3459632 - 3462406 (+)
Gene ID: B38_contig_1193_2720
Type: pfam
Location: 3462418 - 3464052 (+)
Gene ID: B38_contig_1193_2721
Type: pfam
Location: 3464283 - 3464594 (+)
Gene ID: B38_contig_1193_2722
Type: TC
Location: 3464603 - 3465559 (+)
Gene ID: B38_contig_1193_2723
Type: TC
Location: 3465592 - 3466935 (+)
Gene ID: B38_contig_1193_2724
Type: TC
Location: 3466948 - 3467937 (+)
Gene ID: B38_contig_1193_2725
Type: TC
Location: 3467934 - 3468563 (+)
Gene ID: B38_contig_1193_2726
Type: TC
Location: 3468603 - 3469166 (+)
Gene ID: B38_contig_1193_2727
Type: TC
Location: 3469186 - 3469797 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B38_contig_1193_2715 vegan > omnivore 1.09792 0.01269
B38_contig_1193_2717 vegan > omnivore 1.03751 0.01269
B38_contig_1193_2718 vegetarian > omnivore 1.06259 0.00672
B38_contig_1193_2718 vegan > omnivore 1.13599 0.01269
B38_contig_1193_2719 vegetarian > omnivore 1.58104 0.00672
B38_contig_1193_2719 vegan > omnivore 1.25047 0.01269
B38_contig_1193_2720 vegan > omnivore 1.15225 0.01269
B38_contig_1193_2720 vegetarian > omnivore 1.57441 0.00672
B38_contig_1193_2721 vegan > omnivore 1.56966 0.01269
B38_contig_1193_2721 vegetarian > omnivore 1.94692 0.00672
B38_contig_1193_2722 vegan > omnivore 1.23849 0.01269
B38_contig_1193_2722 vegetarian > omnivore 1.86166 0.00672
B38_contig_1193_2723 vegan > omnivore 1.07063 0.01269
B38_contig_1193_2723 vegetarian > omnivore 1.60191 0.00672
B38_contig_1193_2727 vegan > omnivore 1.07860 0.01269
B38_contig_1193_2727 vegetarian > omnivore 1.28601 0.00672

🧭 Explore Read Mapping of CGC

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