Cluster: B38.bin_6_CGC37
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: B38.bin_6
- CGC Family ID: CGCFAM_07484
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B38_contig_1193 | B38_contig_1193_2377 | 2976522 | 2977610 | + | 2.A.6.1.2 |
| TC | B38_contig_1193 | B38_contig_1193_2378 | 2977626 | 2980751 | + | 2.A.6.1.17 |
| TF | B38_contig_1193 | B38_contig_1193_2379 | 2980786 | 2981478 | + | Trans_reg_C |
| STP | B38_contig_1193 | B38_contig_1193_2380 | 2981497 | 2982840 | + | HATPase_c | HisKA |
| TC | B38_contig_1193 | B38_contig_1193_2381 | 2983049 | 2984572 | + | 2.A.2.3.4 |
| CAZyme | B38_contig_1193 | B38_contig_1193_2382 | 2984603 | 2985721 | + | GH10 |
| CAZyme | B38_contig_1193 | B38_contig_1193_2383 | 2985794 | 2986765 | + | GH43_1 |
| CAZyme | B38_contig_1193 | B38_contig_1193_2384 | 2986758 | 2988833 | + | GH67 |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_2385 | 2989082 | 2991640 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B38_contig_1193 | B38_contig_1193_2386 | 2991670 | 2994969 | + | 1.B.14.6.1 |
Gene ID: B38_contig_1193_2377
Type: TC
Location: 2976522 - 2977610 (+)
Type: TC
Location: 2976522 - 2977610 (+)
Gene ID: B38_contig_1193_2378
Type: TC
Location: 2977626 - 2980751 (+)
Type: TC
Location: 2977626 - 2980751 (+)
Gene ID: B38_contig_1193_2379
Type: TF
Location: 2980786 - 2981478 (+)
Type: TF
Location: 2980786 - 2981478 (+)
Gene ID: B38_contig_1193_2380
Type: STP
Location: 2981497 - 2982840 (+)
Type: STP
Location: 2981497 - 2982840 (+)
Gene ID: B38_contig_1193_2381
Type: TC
Location: 2983049 - 2984572 (+)
Type: TC
Location: 2983049 - 2984572 (+)
Gene ID: B38_contig_1193_2382
Type: CAZyme
Location: 2984603 - 2985721 (+)
Type: CAZyme
Location: 2984603 - 2985721 (+)
Gene ID: B38_contig_1193_2383
Type: CAZyme
Location: 2985794 - 2986765 (+)
Type: CAZyme
Location: 2985794 - 2986765 (+)
Gene ID: B38_contig_1193_2384
Type: CAZyme
Location: 2986758 - 2988833 (+)
Type: CAZyme
Location: 2986758 - 2988833 (+)
Gene ID: B38_contig_1193_2385
Type:
Location: 2989082 - 2991640 (+)
Type:
Location: 2989082 - 2991640 (+)
Gene ID: B38_contig_1193_2386
Type: TC
Location: 2991670 - 2994969 (+)
Type: TC
Location: 2991670 - 2994969 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella xylaniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B38_contig_1193_2377 | vegetarian > omnivore | 1.40507 | 0.00672 |
| B38_contig_1193_2378 | vegetarian > omnivore | 1.36725 | 0.00672 |
| B38_contig_1193_2379 | vegetarian > omnivore | 1.40965 | 0.00672 |
| B38_contig_1193_2380 | vegetarian > omnivore | 1.41689 | 0.00672 |
| B38_contig_1193_2380 | vegan > omnivore | 1.01512 | 0.01269 |