Cluster: B38.bin_6_CGC29
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: B38.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B38_contig_1193 | B38_contig_1193_1889 | 2385003 | 2388293 | + | 1.B.14.6.2 |
| pfam | B38_contig_1193 | B38_contig_1193_1890 | 2388307 | 2389923 | + | SusD_RagB | SusD-like_3 |
| pfam | B38_contig_1193 | B38_contig_1193_1891 | 2389930 | 2391573 | + | Fasciclin |
| TC | B38_contig_1193 | B38_contig_1193_1892 | 2391578 | 2394673 | + | 1.B.14.6.1 |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_1893 | 2394679 | 2396403 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B38_contig_1193 | B38_contig_1193_1894 | 2396417 | 2399014 | + | CBM6 |
| pfam | B38_contig_1193 | B38_contig_1193_1895 | 2399053 | 2400957 | + | Alginate_lyase | DUF4979 |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_1896 | 2401119 | 2404982 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B38_contig_1193 | B38_contig_1193_1897 | 2405064 | 2406959 | - | GH97 |
| pfam | B38_contig_1193 | B38_contig_1193_1898 | 2407146 | 2409425 | + | Hepar_II_III_C | DUF4962 |
| CAZyme | B38_contig_1193 | B38_contig_1193_1899 | 2409439 | 2411355 | + | GH146 |
| CAZyme | B38_contig_1193 | B38_contig_1193_1900 | 2411442 | 2413673 | - | GH182 |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_1901 | 2413879 | 2414115 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_1902 | 2414099 | 2414308 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B38_contig_1193 | B38_contig_1193_1903 | 2414624 | 2416069 | + | 2.A.1.14.25 |
Gene ID: B38_contig_1193_1889
Type: TC
Location: 2385003 - 2388293 (+)
Type: TC
Location: 2385003 - 2388293 (+)
Gene ID: B38_contig_1193_1890
Type: pfam
Location: 2388307 - 2389923 (+)
Type: pfam
Location: 2388307 - 2389923 (+)
Gene ID: B38_contig_1193_1891
Type: pfam
Location: 2389930 - 2391573 (+)
Type: pfam
Location: 2389930 - 2391573 (+)
Gene ID: B38_contig_1193_1892
Type: TC
Location: 2391578 - 2394673 (+)
Type: TC
Location: 2391578 - 2394673 (+)
Gene ID: B38_contig_1193_1893
Type:
Location: 2394679 - 2396403 (+)
Type:
Location: 2394679 - 2396403 (+)
Gene ID: B38_contig_1193_1894
Type: CAZyme
Location: 2396417 - 2399014 (+)
Type: CAZyme
Location: 2396417 - 2399014 (+)
Gene ID: B38_contig_1193_1895
Type: pfam
Location: 2399053 - 2400957 (+)
Type: pfam
Location: 2399053 - 2400957 (+)
Gene ID: B38_contig_1193_1896
Type:
Location: 2401119 - 2404982 (+)
Type:
Location: 2401119 - 2404982 (+)
Gene ID: B38_contig_1193_1897
Type: CAZyme
Location: 2405064 - 2406959 (-)
Type: CAZyme
Location: 2405064 - 2406959 (-)
Gene ID: B38_contig_1193_1898
Type: pfam
Location: 2407146 - 2409425 (+)
Type: pfam
Location: 2407146 - 2409425 (+)
Gene ID: B38_contig_1193_1899
Type: CAZyme
Location: 2409439 - 2411355 (+)
Type: CAZyme
Location: 2409439 - 2411355 (+)
Gene ID: B38_contig_1193_1900
Type: CAZyme
Location: 2411442 - 2413673 (-)
Type: CAZyme
Location: 2411442 - 2413673 (-)
Gene ID: B38_contig_1193_1901
Type:
Location: 2413879 - 2414115 (+)
Type:
Location: 2413879 - 2414115 (+)
Gene ID: B38_contig_1193_1902
Type:
Location: 2414099 - 2414308 (-)
Type:
Location: 2414099 - 2414308 (-)
Gene ID: B38_contig_1193_1903
Type: TC
Location: 2414624 - 2416069 (+)
Type: TC
Location: 2414624 - 2416069 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella xylaniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B38_contig_1193_1889 | vegetarian > omnivore | 1.48388 | 0.00672 |
| B38_contig_1193_1890 | vegetarian > omnivore | 1.40699 | 0.00672 |
| B38_contig_1193_1892 | vegetarian > omnivore | 2.37110 | 0.00672 |
| B38_contig_1193_1896 | vegetarian > omnivore | 1.67179 | 0.00672 |
| B38_contig_1193_1900 | vegan > omnivore | 1.66896 | 0.01269 |
| B38_contig_1193_1900 | vegetarian > omnivore | 2.15467 | 0.00672 |
| B38_contig_1193_1903 | vegan > omnivore | 1.46869 | 0.01269 |
| B38_contig_1193_1903 | vegetarian > omnivore | 1.86101 | 0.00672 |