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Cluster: B38.bin_6_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B38_contig_1193 B38_contig_1193_1699 2121330 2123369 - 1.B.6.1.14
pfam B38_contig_1193 B38_contig_1193_1700 2123475 2127146 - Alginate_lyase | Laminin_G_3
CAZyme B38_contig_1193 B38_contig_1193_1701 2127362 2129839 - CBM91 | GH43_19 | GH43_9
pfam B38_contig_1193 B38_contig_1193_1702 2129958 2131091 - DUF4934 | DUF5128
pfam B38_contig_1193 B38_contig_1193_1703 2131088 2132233 - DUF4221
TC B38_contig_1193 B38_contig_1193_1704 2132719 2134926 - 3.A.7.7.1
NULL(UNKNOWN) B38_contig_1193 B38_contig_1193_1705 2135137 2136327 + NULL(UNKNOWN)
[View Structural Homologs]
TC B38_contig_1193 B38_contig_1193_1706 2136482 2139616 + 1.B.14.6.1
Gene ID: B38_contig_1193_1699
Type: TC
Location: 2121330 - 2123369 (-)
Gene ID: B38_contig_1193_1700
Type: pfam
Location: 2123475 - 2127146 (-)
Gene ID: B38_contig_1193_1701
Type: CAZyme
Location: 2127362 - 2129839 (-)
Gene ID: B38_contig_1193_1702
Type: pfam
Location: 2129958 - 2131091 (-)
Gene ID: B38_contig_1193_1703
Type: pfam
Location: 2131088 - 2132233 (-)
Gene ID: B38_contig_1193_1704
Type: TC
Location: 2132719 - 2134926 (-)
Gene ID: B38_contig_1193_1705
Type:
Location: 2135137 - 2136327 (+)
Gene ID: B38_contig_1193_1706
Type: TC
Location: 2136482 - 2139616 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B38_contig_1193_1705 vegan > omnivore 1.10811 0.01269

🧭 Explore Read Mapping of CGC

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