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Cluster: B38.bin_6_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B38_contig_1193 B38_contig_1193_1515 1893446 1895053 + GH142
CAZyme B38_contig_1193 B38_contig_1193_1516 1895089 1896489 + GH28
CAZyme B38_contig_1193 B38_contig_1193_1517 1896542 1897939 + GH43_24
pfam B38_contig_1193 B38_contig_1193_1518 1898033 1899043 - Semialdhyde_dh | Semialdhyde_dhC
TC B38_contig_1193 B38_contig_1193_1519 1899068 1901308 + 2.A.37.2.5
pfam B38_contig_1193 B38_contig_1193_1520 1901305 1902021 + ThiF
TC B38_contig_1193 B38_contig_1193_1521 1902029 1902700 + 3.A.1.125.1
Gene ID: B38_contig_1193_1515
Type: CAZyme
Location: 1893446 - 1895053 (+)
Gene ID: B38_contig_1193_1516
Type: CAZyme
Location: 1895089 - 1896489 (+)
Gene ID: B38_contig_1193_1517
Type: CAZyme
Location: 1896542 - 1897939 (+)
Gene ID: B38_contig_1193_1518
Type: pfam
Location: 1898033 - 1899043 (-)
Gene ID: B38_contig_1193_1519
Type: TC
Location: 1899068 - 1901308 (+)
Gene ID: B38_contig_1193_1520
Type: pfam
Location: 1901305 - 1902021 (+)
Gene ID: B38_contig_1193_1521
Type: TC
Location: 1902029 - 1902700 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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