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Cluster: B38.bin_6_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B38_contig_1193 B38_contig_1193_1116 1362517 1363278 + 3.A.1.15.12
pfam B38_contig_1193 B38_contig_1193_1117 1363386 1366697 + TMEM260-like
CAZyme B38_contig_1193 B38_contig_1193_1118 1366722 1367333 + CE4
STP B38_contig_1193 B38_contig_1193_1119 1367330 1368280 + Fer4
CAZyme B38_contig_1193 B38_contig_1193_1120 1369049 1374340 - GH43_19 | GH51_2
Gene ID: B38_contig_1193_1116
Type: TC
Location: 1362517 - 1363278 (+)
Gene ID: B38_contig_1193_1117
Type: pfam
Location: 1363386 - 1366697 (+)
Gene ID: B38_contig_1193_1118
Type: CAZyme
Location: 1366722 - 1367333 (+)
Gene ID: B38_contig_1193_1119
Type: STP
Location: 1367330 - 1368280 (+)
Gene ID: B38_contig_1193_1120
Type: CAZyme
Location: 1369049 - 1374340 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B38_contig_1193_1116 vegan > omnivore 1.35496 0.01269
B38_contig_1193_1116 vegetarian > omnivore 1.45667 0.00672
B38_contig_1193_1118 vegan > omnivore 1.26129 0.01269
B38_contig_1193_1118 vegetarian > omnivore 1.59086 0.00672
B38_contig_1193_1119 vegan > omnivore 1.51796 0.01269
B38_contig_1193_1119 vegetarian > omnivore 1.96352 0.00672
B38_contig_1193_1120 vegan > omnivore 1.43649 0.01269
B38_contig_1193_1120 vegetarian > omnivore 1.71256 0.00672

🧭 Explore Read Mapping of CGC

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