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Cluster: B38.bin_6_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B38_contig_1193 B38_contig_1193_988 1210200 1211210 - 2.A.20.1.4
pfam B38_contig_1193 B38_contig_1193_989 1211227 1211874 - PhoU_div
TC B38_contig_1193 B38_contig_1193_990 1211894 1212523 - 9.B.27.2.3
NULL(UNKNOWN) B38_contig_1193 B38_contig_1193_991 1212628 1213032 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B38_contig_1193 B38_contig_1193_992 1213169 1214272 - GT2
CAZyme B38_contig_1193 B38_contig_1193_993 1214285 1215328 - GT2
TC B38_contig_1193 B38_contig_1193_994 1215405 1217240 - 3.A.1.106.1
CAZyme B38_contig_1193 B38_contig_1193_995 1217990 1218958 - GT8
CAZyme B38_contig_1193 B38_contig_1193_996 1218990 1220066 - GT2
CAZyme B38_contig_1193 B38_contig_1193_997 1220091 1222004 - GT2 | GT8
CAZyme B38_contig_1193 B38_contig_1193_998 1222013 1222927 - GT2
CAZyme B38_contig_1193 B38_contig_1193_999 1222937 1223779 - GT11
CAZyme B38_contig_1193 B38_contig_1193_1000 1224054 1225064 + GT90
CAZyme B38_contig_1193 B38_contig_1193_1001 1225076 1226005 + GT8
CAZyme B38_contig_1193 B38_contig_1193_1002 1226106 1226924 + GT32
CAZyme B38_contig_1193 B38_contig_1193_1003 1226936 1227832 + GT2
CAZyme B38_contig_1193 B38_contig_1193_1004 1227852 1228898 + GT2
CAZyme B38_contig_1193 B38_contig_1193_1005 1228911 1229810 - GT2
Gene ID: B38_contig_1193_988
Type: TC
Location: 1210200 - 1211210 (-)
Gene ID: B38_contig_1193_989
Type: pfam
Location: 1211227 - 1211874 (-)
Gene ID: B38_contig_1193_990
Type: TC
Location: 1211894 - 1212523 (-)
Gene ID: B38_contig_1193_991
Type:
Location: 1212628 - 1213032 (-)
Gene ID: B38_contig_1193_992
Type: CAZyme
Location: 1213169 - 1214272 (-)
Gene ID: B38_contig_1193_993
Type: CAZyme
Location: 1214285 - 1215328 (-)
Gene ID: B38_contig_1193_994
Type: TC
Location: 1215405 - 1217240 (-)
Gene ID: B38_contig_1193_995
Type: CAZyme
Location: 1217990 - 1218958 (-)
Gene ID: B38_contig_1193_996
Type: CAZyme
Location: 1218990 - 1220066 (-)
Gene ID: B38_contig_1193_997
Type: CAZyme
Location: 1220091 - 1222004 (-)
Gene ID: B38_contig_1193_998
Type: CAZyme
Location: 1222013 - 1222927 (-)
Gene ID: B38_contig_1193_999
Type: CAZyme
Location: 1222937 - 1223779 (-)
Gene ID: B38_contig_1193_1000
Type: CAZyme
Location: 1224054 - 1225064 (+)
Gene ID: B38_contig_1193_1001
Type: CAZyme
Location: 1225076 - 1226005 (+)
Gene ID: B38_contig_1193_1002
Type: CAZyme
Location: 1226106 - 1226924 (+)
Gene ID: B38_contig_1193_1003
Type: CAZyme
Location: 1226936 - 1227832 (+)
Gene ID: B38_contig_1193_1004
Type: CAZyme
Location: 1227852 - 1228898 (+)
Gene ID: B38_contig_1193_1005
Type: CAZyme
Location: 1228911 - 1229810 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B38_contig_1193_995 vegan > omnivore 2.88886 0.00958
B38_contig_1193_995 vegetarian > omnivore 2.97958 0.00672
B38_contig_1193_996 vegan > omnivore 14.69593 0.00565
B38_contig_1193_996 vegetarian > omnivore 14.52808 0.00672
B38_contig_1193_997 vegan > omnivore 14.79041 0.00958
B38_contig_1193_997 vegetarian > omnivore 14.23758 0.00565
B38_contig_1193_998 vegetarian > omnivore 5.98032 0.00672
B38_contig_1193_998 vegan > omnivore 6.27830 0.01269
B38_contig_1193_999 vegetarian > omnivore 2.14896 0.00672
B38_contig_1193_999 vegan > omnivore 2.30791 0.01269

🧭 Explore Read Mapping of CGC

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