Cluster: B38.bin_6_CGC10
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate:
- Genome ID: B38.bin_6
- CGC Family ID: CGCFAM_07479
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B38_contig_1193 | B38_contig_1193_934 | 1114869 | 1118057 | - | 1.B.14.6.1 |
| pfam | B38_contig_1193 | B38_contig_1193_935 | 1118086 | 1119657 | - | Fasciclin |
| pfam | B38_contig_1193 | B38_contig_1193_936 | 1119683 | 1121554 | - | Fasciclin |
| TC | B38_contig_1193 | B38_contig_1193_937 | 1121560 | 1123122 | - | 8.A.46.1.4 |
| TC | B38_contig_1193 | B38_contig_1193_938 | 1123143 | 1126460 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_939 | 1126483 | 1129104 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B38_contig_1193 | B38_contig_1193_940 | 1129526 | 1129786 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B38_contig_1193 | B38_contig_1193_941 | 1130186 | 1132402 | - | GH92 |
| CAZyme | B38_contig_1193 | B38_contig_1193_942 | 1132411 | 1134807 | - | GH95 |
| TF | B38_contig_1193 | B38_contig_1193_943 | 1135119 | 1139192 | + | HTH_AraC |
| CAZyme | B38_contig_1193 | B38_contig_1193_944 | 1139362 | 1142313 | + | CBM32 | GH2 |
| CAZyme | B38_contig_1193 | B38_contig_1193_945 | 1142383 | 1144374 | + | CE20 | CE20 |
| CAZyme | B38_contig_1193 | B38_contig_1193_946 | 1144413 | 1146569 | + | GH36 |
| CAZyme | B38_contig_1193 | B38_contig_1193_947 | 1146588 | 1148792 | + | GH36 |
| pfam | B38_contig_1193 | B38_contig_1193_948 | 1148988 | 1150010 | + | Porin_O_P |
| pfam | B38_contig_1193 | B38_contig_1193_949 | 1150137 | 1151666 | - | Acetyltransf_1 | CN_hydrolase |
| TC | B38_contig_1193 | B38_contig_1193_950 | 1151826 | 1152773 | + | 2.A.124.1.2 |
Gene ID: B38_contig_1193_934
Type: TC
Location: 1114869 - 1118057 (-)
Type: TC
Location: 1114869 - 1118057 (-)
Gene ID: B38_contig_1193_935
Type: pfam
Location: 1118086 - 1119657 (-)
Type: pfam
Location: 1118086 - 1119657 (-)
Gene ID: B38_contig_1193_936
Type: pfam
Location: 1119683 - 1121554 (-)
Type: pfam
Location: 1119683 - 1121554 (-)
Gene ID: B38_contig_1193_937
Type: TC
Location: 1121560 - 1123122 (-)
Type: TC
Location: 1121560 - 1123122 (-)
Gene ID: B38_contig_1193_938
Type: TC
Location: 1123143 - 1126460 (-)
Type: TC
Location: 1123143 - 1126460 (-)
Gene ID: B38_contig_1193_939
Type:
Location: 1126483 - 1129104 (-)
Type:
Location: 1126483 - 1129104 (-)
Gene ID: B38_contig_1193_940
Type:
Location: 1129526 - 1129786 (-)
Type:
Location: 1129526 - 1129786 (-)
Gene ID: B38_contig_1193_941
Type: CAZyme
Location: 1130186 - 1132402 (-)
Type: CAZyme
Location: 1130186 - 1132402 (-)
Gene ID: B38_contig_1193_942
Type: CAZyme
Location: 1132411 - 1134807 (-)
Type: CAZyme
Location: 1132411 - 1134807 (-)
Gene ID: B38_contig_1193_943
Type: TF
Location: 1135119 - 1139192 (+)
Type: TF
Location: 1135119 - 1139192 (+)
Gene ID: B38_contig_1193_944
Type: CAZyme
Location: 1139362 - 1142313 (+)
Type: CAZyme
Location: 1139362 - 1142313 (+)
Gene ID: B38_contig_1193_945
Type: CAZyme
Location: 1142383 - 1144374 (+)
Type: CAZyme
Location: 1142383 - 1144374 (+)
Gene ID: B38_contig_1193_946
Type: CAZyme
Location: 1144413 - 1146569 (+)
Type: CAZyme
Location: 1144413 - 1146569 (+)
Gene ID: B38_contig_1193_947
Type: CAZyme
Location: 1146588 - 1148792 (+)
Type: CAZyme
Location: 1146588 - 1148792 (+)
Gene ID: B38_contig_1193_948
Type: pfam
Location: 1148988 - 1150010 (+)
Type: pfam
Location: 1148988 - 1150010 (+)
Gene ID: B38_contig_1193_949
Type: pfam
Location: 1150137 - 1151666 (-)
Type: pfam
Location: 1150137 - 1151666 (-)
Gene ID: B38_contig_1193_950
Type: TC
Location: 1151826 - 1152773 (+)
Type: TC
Location: 1151826 - 1152773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella xylaniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B38_contig_1193_942 | vegan > omnivore | 1.13893 | 0.01269 |
| B38_contig_1193_946 | vegan > omnivore | 1.42387 | 0.01269 |
| B38_contig_1193_946 | vegetarian > omnivore | 1.05232 | 0.00672 |