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Cluster: B36.bin_7_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_162 B36_contig_162_181 203828 205171 + 4.A.3.2.9
CAZyme B36_contig_162 B36_contig_162_182 205207 206640 + GH1
NULL(UNKNOWN) B36_contig_162 B36_contig_162_183 206651 206944 + NULL(UNKNOWN)
[View Structural Homologs]
TC B36_contig_162 B36_contig_162_184 206964 207326 + 4.A.3.2.9
TC B36_contig_162 B36_contig_162_185 207362 207652 + 4.A.3.2.6
pfam B36_contig_162 B36_contig_162_186 207768 208274 - Sod_Cu
TF B36_contig_162 B36_contig_162_187 208299 209222 - HTH_1
TC B36_contig_162 B36_contig_162_188 209419 210813 + 2.A.25.1.5
Gene ID: B36_contig_162_181
Type: TC
Location: 203828 - 205171 (+)
Gene ID: B36_contig_162_182
Type: CAZyme
Location: 205207 - 206640 (+)
Gene ID: B36_contig_162_183
Type:
Location: 206651 - 206944 (+)
Gene ID: B36_contig_162_184
Type: TC
Location: 206964 - 207326 (+)
Gene ID: B36_contig_162_185
Type: TC
Location: 207362 - 207652 (+)
Gene ID: B36_contig_162_186
Type: pfam
Location: 207768 - 208274 (-)
Gene ID: B36_contig_162_187
Type: TF
Location: 208299 - 209222 (-)
Gene ID: B36_contig_162_188
Type: TC
Location: 209419 - 210813 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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