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Cluster: B36.bin_7_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B36_contig_160 B36_contig_160_626 700196 701599 - GH4
TF B36_contig_160 B36_contig_160_627 701828 702859 + HTH_AraC | HTH_AraC
TF B36_contig_160 B36_contig_160_628 702941 704350 - HTH_AraC
TC B36_contig_160 B36_contig_160_629 704344 706173 - 9.B.33.1.1
pfam B36_contig_160 B36_contig_160_630 706554 707816 - DEDD_Tnp_IS110 | Transposase_20
STP B36_contig_160 B36_contig_160_631 708112 709470 + SBP_bac_1
TC B36_contig_160 B36_contig_160_632 709572 710462 + 3.A.1.1.11
TC B36_contig_160 B36_contig_160_633 710466 711311 + 3.A.1.1.11
CAZyme B36_contig_160 B36_contig_160_634 711363 712409 + GH105
pfam B36_contig_160 B36_contig_160_635 712840 713256 + HIT | DcpS_C
STP B36_contig_160 B36_contig_160_636 713277 713813 + Sigma70_r4_2
CAZyme B36_contig_160 B36_contig_160_637 713935 715005 - GT28
Gene ID: B36_contig_160_626
Type: CAZyme
Location: 700196 - 701599 (-)
Gene ID: B36_contig_160_627
Type: TF
Location: 701828 - 702859 (+)
Gene ID: B36_contig_160_628
Type: TF
Location: 702941 - 704350 (-)
Gene ID: B36_contig_160_629
Type: TC
Location: 704344 - 706173 (-)
Gene ID: B36_contig_160_630
Type: pfam
Location: 706554 - 707816 (-)
Gene ID: B36_contig_160_631
Type: STP
Location: 708112 - 709470 (+)
Gene ID: B36_contig_160_632
Type: TC
Location: 709572 - 710462 (+)
Gene ID: B36_contig_160_633
Type: TC
Location: 710466 - 711311 (+)
Gene ID: B36_contig_160_634
Type: CAZyme
Location: 711363 - 712409 (+)
Gene ID: B36_contig_160_635
Type: pfam
Location: 712840 - 713256 (+)
Gene ID: B36_contig_160_636
Type: STP
Location: 713277 - 713813 (+)
Gene ID: B36_contig_160_637
Type: CAZyme
Location: 713935 - 715005 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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