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Cluster: B36.bin_7_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B36_contig_160 B36_contig_160_385 418418 421477 - GH2
pfam B36_contig_160 B36_contig_160_386 421483 423270 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme B36_contig_160 B36_contig_160_387 423292 425286 - GH28
NULL(UNKNOWN) B36_contig_160 B36_contig_160_388 425333 427771 - NULL(UNKNOWN)
[View Structural Homologs]
TC B36_contig_160 B36_contig_160_389 427847 428713 - 3.A.1.1.34
TC B36_contig_160 B36_contig_160_390 428724 429638 - 3.A.1.1.11
STP B36_contig_160 B36_contig_160_391 429753 431159 - SBP_bac_1
TF B36_contig_160 B36_contig_160_392 431414 433018 + HTH_AraC
TC B36_contig_160 B36_contig_160_393 433039 434844 + 8.A.59.2.1
pfam B36_contig_160 B36_contig_160_394 434971 435204 + NifU
CAZyme B36_contig_160 B36_contig_160_395 435271 438249 + GH38
CAZyme B36_contig_160 B36_contig_160_396 438251 439744 + GH51_1
Gene ID: B36_contig_160_385
Type: CAZyme
Location: 418418 - 421477 (-)
Gene ID: B36_contig_160_386
Type: pfam
Location: 421483 - 423270 (-)
Gene ID: B36_contig_160_387
Type: CAZyme
Location: 423292 - 425286 (-)
Gene ID: B36_contig_160_388
Type:
Location: 425333 - 427771 (-)
Gene ID: B36_contig_160_389
Type: TC
Location: 427847 - 428713 (-)
Gene ID: B36_contig_160_390
Type: TC
Location: 428724 - 429638 (-)
Gene ID: B36_contig_160_391
Type: STP
Location: 429753 - 431159 (-)
Gene ID: B36_contig_160_392
Type: TF
Location: 431414 - 433018 (+)
Gene ID: B36_contig_160_393
Type: TC
Location: 433039 - 434844 (+)
Gene ID: B36_contig_160_394
Type: pfam
Location: 434971 - 435204 (+)
Gene ID: B36_contig_160_395
Type: CAZyme
Location: 435271 - 438249 (+)
Gene ID: B36_contig_160_396
Type: CAZyme
Location: 438251 - 439744 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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