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Cluster: B36.bin_4_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_91 B36_contig_91_317 379551 380894 + 2.A.66.1.33
pfam B36_contig_91 B36_contig_91_318 381062 381853 + SseB | SseB_C
TC B36_contig_91 B36_contig_91_319 381872 383278 + 2.A.66.1.37
NULL(UNKNOWN) B36_contig_91 B36_contig_91_320 383332 383562 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B36_contig_91 B36_contig_91_321 383736 384557 - CE4
pfam B36_contig_91 B36_contig_91_322 384729 385325 + SRAP
TF B36_contig_91 B36_contig_91_323 385332 385760 - MarR
TC B36_contig_91 B36_contig_91_324 385867 387729 - 3.A.1.135.5
TC B36_contig_91 B36_contig_91_325 387729 389453 - 3.A.1.135.5
pfam B36_contig_91 B36_contig_91_326 389782 390471 + Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_3
TF B36_contig_91 B36_contig_91_327 391101 391856 + HTH_6
TC B36_contig_91 B36_contig_91_328 392120 394036 + 4.A.2.1.3
CAZyme B36_contig_91 B36_contig_91_329 394064 396874 + GH38
TC B36_contig_91 B36_contig_91_330 397147 397902 + 2.A.102.3.2
Gene ID: B36_contig_91_317
Type: TC
Location: 379551 - 380894 (+)
Gene ID: B36_contig_91_318
Type: pfam
Location: 381062 - 381853 (+)
Gene ID: B36_contig_91_319
Type: TC
Location: 381872 - 383278 (+)
Gene ID: B36_contig_91_320
Type:
Location: 383332 - 383562 (-)
Gene ID: B36_contig_91_321
Type: CAZyme
Location: 383736 - 384557 (-)
Gene ID: B36_contig_91_322
Type: pfam
Location: 384729 - 385325 (+)
Gene ID: B36_contig_91_323
Type: TF
Location: 385332 - 385760 (-)
Gene ID: B36_contig_91_324
Type: TC
Location: 385867 - 387729 (-)
Gene ID: B36_contig_91_325
Type: TC
Location: 387729 - 389453 (-)
Gene ID: B36_contig_91_326
Type: pfam
Location: 389782 - 390471 (+)
Gene ID: B36_contig_91_327
Type: TF
Location: 391101 - 391856 (+)
Gene ID: B36_contig_91_328
Type: TC
Location: 392120 - 394036 (+)
Gene ID: B36_contig_91_329
Type: CAZyme
Location: 394064 - 396874 (+)
Gene ID: B36_contig_91_330
Type: TC
Location: 397147 - 397902 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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