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Cluster: B36.bin_4_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B36_contig_88 B36_contig_88_2821 3205403 3206389 - GT2
NULL(UNKNOWN) B36_contig_88 B36_contig_88_2822 3206379 3207692 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B36_contig_88 B36_contig_88_2823 3207717 3208403 - GT2
pfam B36_contig_88 B36_contig_88_2824 3208454 3209569 - Aminotran_1_2 | Aminotran_5 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP | Beta_elim_lyase
CAZyme B36_contig_88 B36_contig_88_2825 3209593 3210492 - GT2
CAZyme B36_contig_88 B36_contig_88_2826 3210504 3211514 - GT8
peptidase B36_contig_88 B36_contig_88_2827 3211654 3213129 + C82.UNA
CAZyme B36_contig_88 B36_contig_88_2828 3213169 3214140 - GT2
pfam B36_contig_88 B36_contig_88_2829 3214154 3215128 - ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N
TC B36_contig_88 B36_contig_88_2830 3215258 3216751 - 2.A.80.1.1
Gene ID: B36_contig_88_2821
Type: CAZyme
Location: 3205403 - 3206389 (-)
Gene ID: B36_contig_88_2822
Type:
Location: 3206379 - 3207692 (-)
Gene ID: B36_contig_88_2823
Type: CAZyme
Location: 3207717 - 3208403 (-)
Gene ID: B36_contig_88_2824
Type: pfam
Location: 3208454 - 3209569 (-)
Gene ID: B36_contig_88_2825
Type: CAZyme
Location: 3209593 - 3210492 (-)
Gene ID: B36_contig_88_2826
Type: CAZyme
Location: 3210504 - 3211514 (-)
Gene ID: B36_contig_88_2827
Type: peptidase
Location: 3211654 - 3213129 (+)
Gene ID: B36_contig_88_2828
Type: CAZyme
Location: 3213169 - 3214140 (-)
Gene ID: B36_contig_88_2829
Type: pfam
Location: 3214154 - 3215128 (-)
Gene ID: B36_contig_88_2830
Type: TC
Location: 3215258 - 3216751 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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