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Cluster: B36.bin_4_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_88 B36_contig_88_2505 2842931 2843758 - 3.A.1.1.34
TC B36_contig_88 B36_contig_88_2506 2843772 2844686 - 3.A.1.1.11
STP B36_contig_88 B36_contig_88_2507 2844702 2846033 - SBP_bac_1
TF B36_contig_88 B36_contig_88_2508 2846169 2847392 - HTH_AraC | HTH_AraC
TC B36_contig_88 B36_contig_88_2509 2847386 2849185 - 8.A.59.2.1
pfam B36_contig_88 B36_contig_88_2510 2849380 2850129 - S6PP | S6PP | Hydrolase_3
CAZyme B36_contig_88 B36_contig_88_2511 2850110 2851309 - CE9
CAZyme B36_contig_88 B36_contig_88_2512 2851547 2852869 - GH4
TC B36_contig_88 B36_contig_88_2513 2852991 2853452 - 4.A.1.1.13
pfam B36_contig_88 B36_contig_88_2514 2853697 2855061 - Lyase_1 | ADSL_C
TC B36_contig_88 B36_contig_88_2515 2855072 2856646 - 4.A.1.1.3
Gene ID: B36_contig_88_2505
Type: TC
Location: 2842931 - 2843758 (-)
Gene ID: B36_contig_88_2506
Type: TC
Location: 2843772 - 2844686 (-)
Gene ID: B36_contig_88_2507
Type: STP
Location: 2844702 - 2846033 (-)
Gene ID: B36_contig_88_2508
Type: TF
Location: 2846169 - 2847392 (-)
Gene ID: B36_contig_88_2509
Type: TC
Location: 2847386 - 2849185 (-)
Gene ID: B36_contig_88_2510
Type: pfam
Location: 2849380 - 2850129 (-)
Gene ID: B36_contig_88_2511
Type: CAZyme
Location: 2850110 - 2851309 (-)
Gene ID: B36_contig_88_2512
Type: CAZyme
Location: 2851547 - 2852869 (-)
Gene ID: B36_contig_88_2513
Type: TC
Location: 2852991 - 2853452 (-)
Gene ID: B36_contig_88_2514
Type: pfam
Location: 2853697 - 2855061 (-)
Gene ID: B36_contig_88_2515
Type: TC
Location: 2855072 - 2856646 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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