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Cluster: B36.bin_4_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_88 B36_contig_88_1698 1967139 1967960 - 3.A.1.1.32
TC B36_contig_88 B36_contig_88_1699 1967957 1968832 - 3.A.1.1.7
STP B36_contig_88 B36_contig_88_1700 1968848 1970185 - SBP_bac_1
TC B36_contig_88 B36_contig_88_1701 1970371 1972101 + 8.A.59.2.1
TF B36_contig_88 B36_contig_88_1702 1972098 1973468 + HTH_AraC | HTH_AraC
STP B36_contig_88 B36_contig_88_1703 1973612 1974673 + SBP_bac_1
TC B36_contig_88 B36_contig_88_1704 1974681 1976354 + 8.A.59.2.1
TF B36_contig_88 B36_contig_88_1705 1976357 1977136 + HTH_AraC | HTH_AraC
STP B36_contig_88 B36_contig_88_1706 1977274 1978413 + SBP_bac_1
TC B36_contig_88 B36_contig_88_1707 1978620 1980305 + 3.A.1.20.4
TC B36_contig_88 B36_contig_88_1708 1980317 1981387 + 3.A.1.1.16
peptidase B36_contig_88 B36_contig_88_1709 1981575 1982705 - M20.UPW
CAZyme B36_contig_88 B36_contig_88_1710 1982730 1984193 - GH1
TC B36_contig_88 B36_contig_88_1711 1984204 1986072 - 4.A.1.2.11
Gene ID: B36_contig_88_1698
Type: TC
Location: 1967139 - 1967960 (-)
Gene ID: B36_contig_88_1699
Type: TC
Location: 1967957 - 1968832 (-)
Gene ID: B36_contig_88_1700
Type: STP
Location: 1968848 - 1970185 (-)
Gene ID: B36_contig_88_1701
Type: TC
Location: 1970371 - 1972101 (+)
Gene ID: B36_contig_88_1702
Type: TF
Location: 1972098 - 1973468 (+)
Gene ID: B36_contig_88_1703
Type: STP
Location: 1973612 - 1974673 (+)
Gene ID: B36_contig_88_1704
Type: TC
Location: 1974681 - 1976354 (+)
Gene ID: B36_contig_88_1705
Type: TF
Location: 1976357 - 1977136 (+)
Gene ID: B36_contig_88_1706
Type: STP
Location: 1977274 - 1978413 (+)
Gene ID: B36_contig_88_1707
Type: TC
Location: 1978620 - 1980305 (+)
Gene ID: B36_contig_88_1708
Type: TC
Location: 1980317 - 1981387 (+)
Gene ID: B36_contig_88_1709
Type: peptidase
Location: 1981575 - 1982705 (-)
Gene ID: B36_contig_88_1710
Type: CAZyme
Location: 1982730 - 1984193 (-)
Gene ID: B36_contig_88_1711
Type: TC
Location: 1984204 - 1986072 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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