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Cluster: B36.bin_4_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_487 B36_contig_487_59 44892 46493 - 2.A.68.1.2
TF B36_contig_487 B36_contig_487_60 46728 47612 + HTH_1
pfam B36_contig_487 B36_contig_487_61 47706 50711 - LytR_cpsA_psr
TC B36_contig_487 B36_contig_487_62 50798 52213 - 9.B.18.1.1
CAZyme B36_contig_487 B36_contig_487_63 52540 53535 - GT2
CAZyme B36_contig_487 B36_contig_487_64 53532 55748 - GT2 | GT2
CAZyme B36_contig_487 B36_contig_487_65 55752 56729 - GT2
Gene ID: B36_contig_487_59
Type: TC
Location: 44892 - 46493 (-)
Gene ID: B36_contig_487_60
Type: TF
Location: 46728 - 47612 (+)
Gene ID: B36_contig_487_61
Type: pfam
Location: 47706 - 50711 (-)
Gene ID: B36_contig_487_62
Type: TC
Location: 50798 - 52213 (-)
Gene ID: B36_contig_487_63
Type: CAZyme
Location: 52540 - 53535 (-)
Gene ID: B36_contig_487_64
Type: CAZyme
Location: 53532 - 55748 (-)
Gene ID: B36_contig_487_65
Type: CAZyme
Location: 55752 - 56729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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