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Cluster: B36.bin_4_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B36_contig_1059 B36_contig_1059_21 22723 23538 + 3.A.1.17.1
TC B36_contig_1059 B36_contig_1059_22 23535 24323 + 3.A.1.17.1
TC B36_contig_1059 B36_contig_1059_23 24323 25069 + 3.A.1.16.2
TC B36_contig_1059 B36_contig_1059_24 25091 25840 + 3.A.1.16.1
pfam B36_contig_1059 B36_contig_1059_25 25862 26719 + TIM
pfam B36_contig_1059 B36_contig_1059_26 26743 28233 + Lar_N
CAZyme B36_contig_1059 B36_contig_1059_27 28428 29513 - GT2
pfam B36_contig_1059 B36_contig_1059_28 29715 31235 - Collagen | Collagen
STP B36_contig_1059 B36_contig_1059_29 31476 36170 + EAL | GGDEF | GGDEF
TC B36_contig_1059 B36_contig_1059_30 36245 37261 - 9.A.23.1.1
Gene ID: B36_contig_1059_21
Type: TC
Location: 22723 - 23538 (+)
Gene ID: B36_contig_1059_22
Type: TC
Location: 23535 - 24323 (+)
Gene ID: B36_contig_1059_23
Type: TC
Location: 24323 - 25069 (+)
Gene ID: B36_contig_1059_24
Type: TC
Location: 25091 - 25840 (+)
Gene ID: B36_contig_1059_25
Type: pfam
Location: 25862 - 26719 (+)
Gene ID: B36_contig_1059_26
Type: pfam
Location: 26743 - 28233 (+)
Gene ID: B36_contig_1059_27
Type: CAZyme
Location: 28428 - 29513 (-)
Gene ID: B36_contig_1059_28
Type: pfam
Location: 29715 - 31235 (-)
Gene ID: B36_contig_1059_29
Type: STP
Location: 31476 - 36170 (+)
Gene ID: B36_contig_1059_30
Type: TC
Location: 36245 - 37261 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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