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Cluster: B36.bin_26_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B36_contig_1677 B36_contig_1677_25 22737 23663 + GT2
pfam B36_contig_1677 B36_contig_1677_26 23734 24576 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC B36_contig_1677 B36_contig_1677_27 24614 25996 + 3.A.1.104.1
TC B36_contig_1677 B36_contig_1677_28 26024 27328 + 3.A.1.103.6
pfam B36_contig_1677 B36_contig_1677_29 27515 28828 + Radical_SAM
pfam B36_contig_1677 B36_contig_1677_30 28842 30380 + MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme B36_contig_1677 B36_contig_1677_31 30397 33045 + GT2
Gene ID: B36_contig_1677_25
Type: CAZyme
Location: 22737 - 23663 (+)
Gene ID: B36_contig_1677_26
Type: pfam
Location: 23734 - 24576 (+)
Gene ID: B36_contig_1677_27
Type: TC
Location: 24614 - 25996 (+)
Gene ID: B36_contig_1677_28
Type: TC
Location: 26024 - 27328 (+)
Gene ID: B36_contig_1677_29
Type: pfam
Location: 27515 - 28828 (+)
Gene ID: B36_contig_1677_30
Type: pfam
Location: 28842 - 30380 (+)
Gene ID: B36_contig_1677_31
Type: CAZyme
Location: 30397 - 33045 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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