Cluster: B36.bin_14_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_842 | B36_contig_842_38 | 36470 | 37279 | - | 3.A.1.23.8 |
| TC | B36_contig_842 | B36_contig_842_39 | 37316 | 38218 | - | 3.A.1.23.8 |
| pfam | B36_contig_842 | B36_contig_842_40 | 38296 | 38613 | - | CbiN |
| TC | B36_contig_842 | B36_contig_842_41 | 38610 | 39362 | - | 3.A.1.23.6 |
| TF | B36_contig_842 | B36_contig_842_42 | 39813 | 40664 | - | HTH_AraC | HTH_AraC |
| TC | B36_contig_842 | B36_contig_842_43 | 40836 | 42635 | + | 3.A.1.106.3 |
| TC | B36_contig_842 | B36_contig_842_44 | 42638 | 44401 | + | 3.A.1.106.3 |
| TC | B36_contig_842 | B36_contig_842_45 | 44477 | 45145 | - | 3.A.3.7.2 |
| TC | B36_contig_842 | B36_contig_842_46 | 45158 | 47209 | - | 3.A.3.7.2 |
| TC | B36_contig_842 | B36_contig_842_47 | 47390 | 49147 | - | 3.A.3.7.2 |
| NULL(UNKNOWN) | B36_contig_842 | B36_contig_842_48 | 49301 | 49399 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B36_contig_842 | B36_contig_842_49 | 49625 | 50836 | - | GH109 |
Gene ID: B36_contig_842_38
Type: TC
Location: 36470 - 37279 (-)
Type: TC
Location: 36470 - 37279 (-)
Gene ID: B36_contig_842_39
Type: TC
Location: 37316 - 38218 (-)
Type: TC
Location: 37316 - 38218 (-)
Gene ID: B36_contig_842_40
Type: pfam
Location: 38296 - 38613 (-)
Type: pfam
Location: 38296 - 38613 (-)
Gene ID: B36_contig_842_41
Type: TC
Location: 38610 - 39362 (-)
Type: TC
Location: 38610 - 39362 (-)
Gene ID: B36_contig_842_42
Type: TF
Location: 39813 - 40664 (-)
Type: TF
Location: 39813 - 40664 (-)
Gene ID: B36_contig_842_43
Type: TC
Location: 40836 - 42635 (+)
Type: TC
Location: 40836 - 42635 (+)
Gene ID: B36_contig_842_44
Type: TC
Location: 42638 - 44401 (+)
Type: TC
Location: 42638 - 44401 (+)
Gene ID: B36_contig_842_45
Type: TC
Location: 44477 - 45145 (-)
Type: TC
Location: 44477 - 45145 (-)
Gene ID: B36_contig_842_46
Type: TC
Location: 45158 - 47209 (-)
Type: TC
Location: 45158 - 47209 (-)
Gene ID: B36_contig_842_47
Type: TC
Location: 47390 - 49147 (-)
Type: TC
Location: 47390 - 49147 (-)
Gene ID: B36_contig_842_48
Type:
Location: 49301 - 49399 (-)
Type:
Location: 49301 - 49399 (-)
Gene ID: B36_contig_842_49
Type: CAZyme
Location: 49625 - 50836 (-)
Type: CAZyme
Location: 49625 - 50836 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_842_39 | vegetarian > omnivore | 1.16513 | 0.01125 |