Cluster: B36.bin_14_CGC55
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: B36.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_407 | B36_contig_407_2708 | 2957337 | 2958122 | - | 2.A.102.4.4 |
| sulfatase | B36_contig_407 | B36_contig_407_2709 | 2958544 | 2959977 | - | S1_26 |
| TC | B36_contig_407 | B36_contig_407_2710 | 2960094 | 2960933 | - | 3.A.1.1.31 |
| TC | B36_contig_407 | B36_contig_407_2711 | 2960952 | 2961869 | - | 3.A.1.1.37 |
| TC | B36_contig_407 | B36_contig_407_2712 | 2962055 | 2963479 | - | 3.A.1.1.5 |
| pfam | B36_contig_407 | B36_contig_407_2713 | 2963522 | 2964382 | - | 3HCDH_N | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| CAZyme | B36_contig_407 | B36_contig_407_2714 | 2965613 | 2967040 | - | CBM16 |
| CAZyme | B36_contig_407 | B36_contig_407_2715 | 2967037 | 2968533 | - | GH31_19 |
| CAZyme | B36_contig_407 | B36_contig_407_2716 | 2968549 | 2970324 | - | GH16_24 |
| pfam | B36_contig_407 | B36_contig_407_2717 | 2970351 | 2971589 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | B36_contig_407 | B36_contig_407_2718 | 2971586 | 2973229 | - | GH123 |
| STP | B36_contig_407 | B36_contig_407_2719 | 2973306 | 2974919 | - | SBP_bac_1 |
| TC | B36_contig_407 | B36_contig_407_2720 | 2974964 | 2975845 | - | 3.A.1.1.10 |
| TC | B36_contig_407 | B36_contig_407_2721 | 2975859 | 2976800 | - | 3.A.1.1.10 |
| TC | B36_contig_407 | B36_contig_407_2722 | 2977076 | 2978869 | + | 8.A.59.2.1 |
Gene ID: B36_contig_407_2708
Type: TC
Location: 2957337 - 2958122 (-)
Type: TC
Location: 2957337 - 2958122 (-)
Gene ID: B36_contig_407_2709
Type: sulfatase
Location: 2958544 - 2959977 (-)
Type: sulfatase
Location: 2958544 - 2959977 (-)
Gene ID: B36_contig_407_2710
Type: TC
Location: 2960094 - 2960933 (-)
Type: TC
Location: 2960094 - 2960933 (-)
Gene ID: B36_contig_407_2711
Type: TC
Location: 2960952 - 2961869 (-)
Type: TC
Location: 2960952 - 2961869 (-)
Gene ID: B36_contig_407_2712
Type: TC
Location: 2962055 - 2963479 (-)
Type: TC
Location: 2962055 - 2963479 (-)
Gene ID: B36_contig_407_2713
Type: pfam
Location: 2963522 - 2964382 (-)
Type: pfam
Location: 2963522 - 2964382 (-)
Gene ID: B36_contig_407_2714
Type: CAZyme
Location: 2965613 - 2967040 (-)
Type: CAZyme
Location: 2965613 - 2967040 (-)
Gene ID: B36_contig_407_2715
Type: CAZyme
Location: 2967037 - 2968533 (-)
Type: CAZyme
Location: 2967037 - 2968533 (-)
Gene ID: B36_contig_407_2716
Type: CAZyme
Location: 2968549 - 2970324 (-)
Type: CAZyme
Location: 2968549 - 2970324 (-)
Gene ID: B36_contig_407_2717
Type: pfam
Location: 2970351 - 2971589 (-)
Type: pfam
Location: 2970351 - 2971589 (-)
Gene ID: B36_contig_407_2718
Type: CAZyme
Location: 2971586 - 2973229 (-)
Type: CAZyme
Location: 2971586 - 2973229 (-)
Gene ID: B36_contig_407_2719
Type: STP
Location: 2973306 - 2974919 (-)
Type: STP
Location: 2973306 - 2974919 (-)
Gene ID: B36_contig_407_2720
Type: TC
Location: 2974964 - 2975845 (-)
Type: TC
Location: 2974964 - 2975845 (-)
Gene ID: B36_contig_407_2721
Type: TC
Location: 2975859 - 2976800 (-)
Type: TC
Location: 2975859 - 2976800 (-)
Gene ID: B36_contig_407_2722
Type: TC
Location: 2977076 - 2978869 (+)
Type: TC
Location: 2977076 - 2978869 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_407_2714 | vegan > omnivore | 1.46134 | 0.00290 |