Cluster: B36.bin_14_CGC53
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B36_contig_407 | B36_contig_407_2660 | 2895791 | 2896627 | + | CE4 |
| pfam | B36_contig_407 | B36_contig_407_2661 | 2896624 | 2897535 | + | Amidase_3 |
| TC | B36_contig_407 | B36_contig_407_2662 | 2897648 | 2898787 | - | 2.A.1.15.18 |
| TC | B36_contig_407 | B36_contig_407_2663 | 2898998 | 2900707 | - | 8.A.7.1.1 |
| STP | B36_contig_407 | B36_contig_407_2664 | 2900736 | 2901638 | - | PfkB |
| TC | B36_contig_407 | B36_contig_407_2665 | 2902171 | 2904822 | + | 3.A.3.2.28 |
| TC | B36_contig_407 | B36_contig_407_2666 | 2905009 | 2906325 | + | 2.A.22.5.2 |
| TC | B36_contig_407 | B36_contig_407_2667 | 2906732 | 2907376 | - | 9.B.31.1.2 |
Gene ID: B36_contig_407_2660
Type: CAZyme
Location: 2895791 - 2896627 (+)
Type: CAZyme
Location: 2895791 - 2896627 (+)
Gene ID: B36_contig_407_2661
Type: pfam
Location: 2896624 - 2897535 (+)
Type: pfam
Location: 2896624 - 2897535 (+)
Gene ID: B36_contig_407_2662
Type: TC
Location: 2897648 - 2898787 (-)
Type: TC
Location: 2897648 - 2898787 (-)
Gene ID: B36_contig_407_2663
Type: TC
Location: 2898998 - 2900707 (-)
Type: TC
Location: 2898998 - 2900707 (-)
Gene ID: B36_contig_407_2664
Type: STP
Location: 2900736 - 2901638 (-)
Type: STP
Location: 2900736 - 2901638 (-)
Gene ID: B36_contig_407_2665
Type: TC
Location: 2902171 - 2904822 (+)
Type: TC
Location: 2902171 - 2904822 (+)
Gene ID: B36_contig_407_2666
Type: TC
Location: 2905009 - 2906325 (+)
Type: TC
Location: 2905009 - 2906325 (+)
Gene ID: B36_contig_407_2667
Type: TC
Location: 2906732 - 2907376 (-)
Type: TC
Location: 2906732 - 2907376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_407_2662 | vegetarian > omnivore | 1.15281 | 0.00863 |
| B36_contig_407_2665 | vegetarian > vegan | 1.39059 | 0.00364 |