Cluster: B36.bin_14_CGC50
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: B36.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_407 | B36_contig_407_2104 | 2282894 | 2283757 | - | 3.A.1.149.1 |
| TF | B36_contig_407 | B36_contig_407_2105 | 2283761 | 2284135 | - | GntR |
| NULL(UNKNOWN) | B36_contig_407 | B36_contig_407_2106 | 2284406 | 2285134 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B36_contig_407 | B36_contig_407_2107 | 2285131 | 2286249 | - | 1.A.23.4.1 |
| pfam | B36_contig_407 | B36_contig_407_2108 | 2286670 | 2287236 | + | ECF-ribofla_trS | ECF_trnsprt |
| sulfatase | B36_contig_407 | B36_contig_407_2109 | 2287454 | 2288596 | + | S1_2 |
| CAZyme | B36_contig_407 | B36_contig_407_2110 | 2288889 | 2290649 | + | GT2 | GT2 |
| NULL(UNKNOWN) | B36_contig_407 | B36_contig_407_2111 | 2290725 | 2291045 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B36_contig_407 | B36_contig_407_2112 | 2291299 | 2293509 | + | 3.A.7.16.1 |
| STP | B36_contig_407 | B36_contig_407_2113 | 2293527 | 2294204 | + | Pribosyltran |
| TF | B36_contig_407 | B36_contig_407_2114 | 2294356 | 2295240 | + | HTH_AraC |
| TC | B36_contig_407 | B36_contig_407_2115 | 2295313 | 2296386 | - | 2.A.86.1.9 |
Gene ID: B36_contig_407_2104
Type: TC
Location: 2282894 - 2283757 (-)
Type: TC
Location: 2282894 - 2283757 (-)
Gene ID: B36_contig_407_2105
Type: TF
Location: 2283761 - 2284135 (-)
Type: TF
Location: 2283761 - 2284135 (-)
Gene ID: B36_contig_407_2106
Type:
Location: 2284406 - 2285134 (-)
Type:
Location: 2284406 - 2285134 (-)
Gene ID: B36_contig_407_2107
Type: TC
Location: 2285131 - 2286249 (-)
Type: TC
Location: 2285131 - 2286249 (-)
Gene ID: B36_contig_407_2108
Type: pfam
Location: 2286670 - 2287236 (+)
Type: pfam
Location: 2286670 - 2287236 (+)
Gene ID: B36_contig_407_2109
Type: sulfatase
Location: 2287454 - 2288596 (+)
Type: sulfatase
Location: 2287454 - 2288596 (+)
Gene ID: B36_contig_407_2110
Type: CAZyme
Location: 2288889 - 2290649 (+)
Type: CAZyme
Location: 2288889 - 2290649 (+)
Gene ID: B36_contig_407_2111
Type:
Location: 2290725 - 2291045 (+)
Type:
Location: 2290725 - 2291045 (+)
Gene ID: B36_contig_407_2112
Type: TC
Location: 2291299 - 2293509 (+)
Type: TC
Location: 2291299 - 2293509 (+)
Gene ID: B36_contig_407_2113
Type: STP
Location: 2293527 - 2294204 (+)
Type: STP
Location: 2293527 - 2294204 (+)
Gene ID: B36_contig_407_2114
Type: TF
Location: 2294356 - 2295240 (+)
Type: TF
Location: 2294356 - 2295240 (+)
Gene ID: B36_contig_407_2115
Type: TC
Location: 2295313 - 2296386 (-)
Type: TC
Location: 2295313 - 2296386 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.