Cluster: B36.bin_14_CGC42
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: B36.bin_14
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_407 | B36_contig_407_1448 | 1633807 | 1634529 | + | 8.A.3.3.4 |
| pfam | B36_contig_407 | B36_contig_407_1449 | 1634526 | 1635269 | + | CpsB_CapC |
| TC | B36_contig_407 | B36_contig_407_1450 | 1635477 | 1636835 | + | 9.B.18.1.3 |
| CAZyme | B36_contig_407 | B36_contig_407_1451 | 1637312 | 1638376 | + | GT94 |
| pfam | B36_contig_407 | B36_contig_407_1452 | 1638389 | 1638868 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | B36_contig_407 | B36_contig_407_1453 | 1638874 | 1640187 | + | GT4 |
| pfam | B36_contig_407 | B36_contig_407_1454 | 1640184 | 1641251 | + | EpsG |
| CAZyme | B36_contig_407 | B36_contig_407_1455 | 1641270 | 1642460 | + | GT4 |
Gene ID: B36_contig_407_1448
Type: TC
Location: 1633807 - 1634529 (+)
Type: TC
Location: 1633807 - 1634529 (+)
Gene ID: B36_contig_407_1449
Type: pfam
Location: 1634526 - 1635269 (+)
Type: pfam
Location: 1634526 - 1635269 (+)
Gene ID: B36_contig_407_1450
Type: TC
Location: 1635477 - 1636835 (+)
Type: TC
Location: 1635477 - 1636835 (+)
Gene ID: B36_contig_407_1451
Type: CAZyme
Location: 1637312 - 1638376 (+)
Type: CAZyme
Location: 1637312 - 1638376 (+)
Gene ID: B36_contig_407_1452
Type: pfam
Location: 1638389 - 1638868 (+)
Type: pfam
Location: 1638389 - 1638868 (+)
Gene ID: B36_contig_407_1453
Type: CAZyme
Location: 1638874 - 1640187 (+)
Type: CAZyme
Location: 1638874 - 1640187 (+)
Gene ID: B36_contig_407_1454
Type: pfam
Location: 1640184 - 1641251 (+)
Type: pfam
Location: 1640184 - 1641251 (+)
Gene ID: B36_contig_407_1455
Type: CAZyme
Location: 1641270 - 1642460 (+)
Type: CAZyme
Location: 1641270 - 1642460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_407_1451 | vegan > omnivore | 1.23937 | 0.02463 |
| B36_contig_407_1452 | vegan > omnivore | 1.70521 | 0.02463 |