Cluster: B36.bin_14_CGC38
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: B36.bin_14
- CGC Family ID: CGCFAM_00047
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_407 | B36_contig_407_1183 | 1345396 | 1347483 | - | 2.A.6.5.1 |
| STP | B36_contig_407 | B36_contig_407_1184 | 1347745 | 1348335 | + | TetR_N |
| pfam | B36_contig_407 | B36_contig_407_1185 | 1348397 | 1348864 | - | Coat_F |
| TC | B36_contig_407 | B36_contig_407_1186 | 1349067 | 1349960 | - | 3.A.1.1.45 |
| TC | B36_contig_407 | B36_contig_407_1187 | 1349957 | 1350889 | - | 3.A.1.1.4 |
| NULL(UNKNOWN) | B36_contig_407 | B36_contig_407_1188 | 1350964 | 1352391 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | B36_contig_407 | B36_contig_407_1189 | 1352452 | 1353459 | - | LacI |
| CAZyme | B36_contig_407 | B36_contig_407_1190 | 1353967 | 1356402 | + | GH94 |
| CAZyme | B36_contig_407 | B36_contig_407_1191 | 1356416 | 1357768 | + | GH1 |
Gene ID: B36_contig_407_1183
Type: TC
Location: 1345396 - 1347483 (-)
Type: TC
Location: 1345396 - 1347483 (-)
Gene ID: B36_contig_407_1184
Type: STP
Location: 1347745 - 1348335 (+)
Type: STP
Location: 1347745 - 1348335 (+)
Gene ID: B36_contig_407_1185
Type: pfam
Location: 1348397 - 1348864 (-)
Type: pfam
Location: 1348397 - 1348864 (-)
Gene ID: B36_contig_407_1186
Type: TC
Location: 1349067 - 1349960 (-)
Type: TC
Location: 1349067 - 1349960 (-)
Gene ID: B36_contig_407_1187
Type: TC
Location: 1349957 - 1350889 (-)
Type: TC
Location: 1349957 - 1350889 (-)
Gene ID: B36_contig_407_1188
Type:
Location: 1350964 - 1352391 (-)
Type:
Location: 1350964 - 1352391 (-)
Gene ID: B36_contig_407_1189
Type: TF
Location: 1352452 - 1353459 (-)
Type: TF
Location: 1352452 - 1353459 (-)
Gene ID: B36_contig_407_1190
Type: CAZyme
Location: 1353967 - 1356402 (+)
Type: CAZyme
Location: 1353967 - 1356402 (+)
Gene ID: B36_contig_407_1191
Type: CAZyme
Location: 1356416 - 1357768 (+)
Type: CAZyme
Location: 1356416 - 1357768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.