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Cluster: B36.bin_14_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B36_contig_407 B36_contig_407_1043 1165364 1167751 + GH94
pfam B36_contig_407 B36_contig_407_1044 1167802 1169214 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC B36_contig_407 B36_contig_407_1045 1169325 1171076 + 8.A.59.2.1
TC B36_contig_407 B36_contig_407_1046 1171205 1172557 + 3.A.1.1.44
TC B36_contig_407 B36_contig_407_1047 1172772 1173662 + 3.A.1.1.34
TC B36_contig_407 B36_contig_407_1048 1173676 1174533 + 3.A.1.1.41
TF B36_contig_407 B36_contig_407_1049 1175005 1175733 + HTH_AraC | HTH_AraC
pfam B36_contig_407 B36_contig_407_1050 1175794 1176186 - ABC_trans_CmpB
CAZyme B36_contig_407 B36_contig_407_1051 1176316 1177092 + GT2
Gene ID: B36_contig_407_1043
Type: CAZyme
Location: 1165364 - 1167751 (+)
Gene ID: B36_contig_407_1044
Type: pfam
Location: 1167802 - 1169214 (+)
Gene ID: B36_contig_407_1045
Type: TC
Location: 1169325 - 1171076 (+)
Gene ID: B36_contig_407_1046
Type: TC
Location: 1171205 - 1172557 (+)
Gene ID: B36_contig_407_1047
Type: TC
Location: 1172772 - 1173662 (+)
Gene ID: B36_contig_407_1048
Type: TC
Location: 1173676 - 1174533 (+)
Gene ID: B36_contig_407_1049
Type: TF
Location: 1175005 - 1175733 (+)
Gene ID: B36_contig_407_1050
Type: pfam
Location: 1175794 - 1176186 (-)
Gene ID: B36_contig_407_1051
Type: CAZyme
Location: 1176316 - 1177092 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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