Cluster: B36.bin_14_CGC31
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 9
- Substrate:
- Genome ID: B36.bin_14
- CGC Family ID: CGCFAM_02377
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B36_contig_407 | B36_contig_407_926 | 1023278 | 1025827 | - | GH2 |
| CAZyme | B36_contig_407 | B36_contig_407_927 | 1025884 | 1028361 | - | GH3 |
| CAZyme | B36_contig_407 | B36_contig_407_928 | 1028390 | 1030795 | - | GH3 |
| CAZyme | B36_contig_407 | B36_contig_407_929 | 1030822 | 1032240 | - | GH43_35 |
| CAZyme | B36_contig_407 | B36_contig_407_930 | 1032279 | 1034939 | - | CBM67 | GH78 |
| CAZyme | B36_contig_407 | B36_contig_407_931 | 1034951 | 1037944 | - | GH2 |
| TF | B36_contig_407 | B36_contig_407_932 | 1038185 | 1039456 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | B36_contig_407 | B36_contig_407_933 | 1039461 | 1039688 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B36_contig_407 | B36_contig_407_934 | 1039877 | 1041274 | + | 2.A.2.3.2 |
| peptidase | B36_contig_407 | B36_contig_407_935 | 1041376 | 1042404 | + | S09.UPW |
| CAZyme | B36_contig_407 | B36_contig_407_936 | 1042398 | 1043984 | + | CE20 | CE20 |
| CAZyme | B36_contig_407 | B36_contig_407_937 | 1044053 | 1045111 | + | GH43_24 |
| NULL(UNKNOWN) | B36_contig_407 | B36_contig_407_938 | 1045148 | 1045345 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B36_contig_407 | B36_contig_407_939 | 1045356 | 1047335 | + | GH2 |
Gene ID: B36_contig_407_926
Type: CAZyme
Location: 1023278 - 1025827 (-)
Type: CAZyme
Location: 1023278 - 1025827 (-)
Gene ID: B36_contig_407_927
Type: CAZyme
Location: 1025884 - 1028361 (-)
Type: CAZyme
Location: 1025884 - 1028361 (-)
Gene ID: B36_contig_407_928
Type: CAZyme
Location: 1028390 - 1030795 (-)
Type: CAZyme
Location: 1028390 - 1030795 (-)
Gene ID: B36_contig_407_929
Type: CAZyme
Location: 1030822 - 1032240 (-)
Type: CAZyme
Location: 1030822 - 1032240 (-)
Gene ID: B36_contig_407_930
Type: CAZyme
Location: 1032279 - 1034939 (-)
Type: CAZyme
Location: 1032279 - 1034939 (-)
Gene ID: B36_contig_407_931
Type: CAZyme
Location: 1034951 - 1037944 (-)
Type: CAZyme
Location: 1034951 - 1037944 (-)
Gene ID: B36_contig_407_932
Type: TF
Location: 1038185 - 1039456 (+)
Type: TF
Location: 1038185 - 1039456 (+)
Gene ID: B36_contig_407_933
Type:
Location: 1039461 - 1039688 (+)
Type:
Location: 1039461 - 1039688 (+)
Gene ID: B36_contig_407_934
Type: TC
Location: 1039877 - 1041274 (+)
Type: TC
Location: 1039877 - 1041274 (+)
Gene ID: B36_contig_407_935
Type: peptidase
Location: 1041376 - 1042404 (+)
Type: peptidase
Location: 1041376 - 1042404 (+)
Gene ID: B36_contig_407_936
Type: CAZyme
Location: 1042398 - 1043984 (+)
Type: CAZyme
Location: 1042398 - 1043984 (+)
Gene ID: B36_contig_407_937
Type: CAZyme
Location: 1044053 - 1045111 (+)
Type: CAZyme
Location: 1044053 - 1045111 (+)
Gene ID: B36_contig_407_938
Type:
Location: 1045148 - 1045345 (+)
Type:
Location: 1045148 - 1045345 (+)
Gene ID: B36_contig_407_939
Type: CAZyme
Location: 1045356 - 1047335 (+)
Type: CAZyme
Location: 1045356 - 1047335 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.