Cluster: B36.bin_14_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: B36.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B36_contig_225 | B36_contig_225_154 | 166824 | 167876 | - | 9.B.18.2.1 |
| STP | B36_contig_225 | B36_contig_225_155 | 167897 | 169114 | - | Fer4 | Fer4 |
| pfam | B36_contig_225 | B36_contig_225_156 | 169104 | 170237 | - | PS_pyruv_trans |
| TC | B36_contig_225 | B36_contig_225_157 | 170254 | 171687 | - | 2.A.66.2.23 |
| CAZyme | B36_contig_225 | B36_contig_225_158 | 171680 | 172837 | - | GT4 |
| pfam | B36_contig_225 | B36_contig_225_159 | 172869 | 174140 | - | Wzy_C |
| NULL(UNKNOWN) | B36_contig_225 | B36_contig_225_160 | 174200 | 175342 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B36_contig_225 | B36_contig_225_161 | 175400 | 176596 | - | GT4 |
| CAZyme | B36_contig_225 | B36_contig_225_162 | 176593 | 177810 | - | GT4 |
| CAZyme | B36_contig_225 | B36_contig_225_163 | 177848 | 179071 | - | GT4 |
| CAZyme | B36_contig_225 | B36_contig_225_164 | 179068 | 179850 | - | GT2 |
| TC | B36_contig_225 | B36_contig_225_165 | 180496 | 181845 | - | 9.B.18.1.3 |
| pfam | B36_contig_225 | B36_contig_225_166 | 182043 | 183008 | + | DDE_Tnp_1 | DUF772 | DDE_Tnp_1_3 | DDE_Tnp_1_6 |
| pfam | B36_contig_225 | B36_contig_225_167 | 183190 | 183933 | - | CpsB_CapC |
| TC | B36_contig_225 | B36_contig_225_168 | 183930 | 184652 | - | 8.A.3.3.4 |
Gene ID: B36_contig_225_154
Type: TC
Location: 166824 - 167876 (-)
Type: TC
Location: 166824 - 167876 (-)
Gene ID: B36_contig_225_155
Type: STP
Location: 167897 - 169114 (-)
Type: STP
Location: 167897 - 169114 (-)
Gene ID: B36_contig_225_156
Type: pfam
Location: 169104 - 170237 (-)
Type: pfam
Location: 169104 - 170237 (-)
Gene ID: B36_contig_225_157
Type: TC
Location: 170254 - 171687 (-)
Type: TC
Location: 170254 - 171687 (-)
Gene ID: B36_contig_225_158
Type: CAZyme
Location: 171680 - 172837 (-)
Type: CAZyme
Location: 171680 - 172837 (-)
Gene ID: B36_contig_225_159
Type: pfam
Location: 172869 - 174140 (-)
Type: pfam
Location: 172869 - 174140 (-)
Gene ID: B36_contig_225_160
Type:
Location: 174200 - 175342 (-)
Type:
Location: 174200 - 175342 (-)
Gene ID: B36_contig_225_161
Type: CAZyme
Location: 175400 - 176596 (-)
Type: CAZyme
Location: 175400 - 176596 (-)
Gene ID: B36_contig_225_162
Type: CAZyme
Location: 176593 - 177810 (-)
Type: CAZyme
Location: 176593 - 177810 (-)
Gene ID: B36_contig_225_163
Type: CAZyme
Location: 177848 - 179071 (-)
Type: CAZyme
Location: 177848 - 179071 (-)
Gene ID: B36_contig_225_164
Type: CAZyme
Location: 179068 - 179850 (-)
Type: CAZyme
Location: 179068 - 179850 (-)
Gene ID: B36_contig_225_165
Type: TC
Location: 180496 - 181845 (-)
Type: TC
Location: 180496 - 181845 (-)
Gene ID: B36_contig_225_166
Type: pfam
Location: 182043 - 183008 (+)
Type: pfam
Location: 182043 - 183008 (+)
Gene ID: B36_contig_225_167
Type: pfam
Location: 183190 - 183933 (-)
Type: pfam
Location: 183190 - 183933 (-)
Gene ID: B36_contig_225_168
Type: TC
Location: 183930 - 184652 (-)
Type: TC
Location: 183930 - 184652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B36_contig_225_166 | vegan > omnivore | 1.08020 | 0.02463 |
| B36_contig_225_167 | vegan > omnivore | 1.22333 | 0.01256 |