Cluster: B36.bin_14_CGC26
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: B36.bin_14
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B36_contig_407 | B36_contig_407_750 | 812497 | 814203 | - | GH13_18 |
| NULL(UNKNOWN) | B36_contig_407 | B36_contig_407_751 | 814215 | 815165 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B36_contig_407 | B36_contig_407_752 | 815162 | 816052 | - | CE1 |
| peptidase | B36_contig_407 | B36_contig_407_753 | 816166 | 817338 | - | S12.UPW |
| CAZyme | B36_contig_407 | B36_contig_407_754 | 817381 | 818850 | - | GH13_18 |
| peptidase | B36_contig_407 | B36_contig_407_755 | 818911 | 820485 | - | S09.UPW |
| TC | B36_contig_407 | B36_contig_407_756 | 820667 | 822442 | + | 9.B.33.1.2 |
| TF | B36_contig_407 | B36_contig_407_757 | 822420 | 824000 | + | HTH_AraC |
| pfam | B36_contig_407 | B36_contig_407_758 | 824167 | 825759 | + | DUF3502 |
| TC | B36_contig_407 | B36_contig_407_759 | 825849 | 826784 | + | 3.A.1.1.29 |
| TC | B36_contig_407 | B36_contig_407_760 | 826800 | 827705 | + | 3.A.1.1.29 |
Gene ID: B36_contig_407_750
Type: CAZyme
Location: 812497 - 814203 (-)
Type: CAZyme
Location: 812497 - 814203 (-)
Gene ID: B36_contig_407_751
Type:
Location: 814215 - 815165 (-)
Type:
Location: 814215 - 815165 (-)
Gene ID: B36_contig_407_752
Type: CAZyme
Location: 815162 - 816052 (-)
Type: CAZyme
Location: 815162 - 816052 (-)
Gene ID: B36_contig_407_753
Type: peptidase
Location: 816166 - 817338 (-)
Type: peptidase
Location: 816166 - 817338 (-)
Gene ID: B36_contig_407_754
Type: CAZyme
Location: 817381 - 818850 (-)
Type: CAZyme
Location: 817381 - 818850 (-)
Gene ID: B36_contig_407_755
Type: peptidase
Location: 818911 - 820485 (-)
Type: peptidase
Location: 818911 - 820485 (-)
Gene ID: B36_contig_407_756
Type: TC
Location: 820667 - 822442 (+)
Type: TC
Location: 820667 - 822442 (+)
Gene ID: B36_contig_407_757
Type: TF
Location: 822420 - 824000 (+)
Type: TF
Location: 822420 - 824000 (+)
Gene ID: B36_contig_407_758
Type: pfam
Location: 824167 - 825759 (+)
Type: pfam
Location: 824167 - 825759 (+)
Gene ID: B36_contig_407_759
Type: TC
Location: 825849 - 826784 (+)
Type: TC
Location: 825849 - 826784 (+)
Gene ID: B36_contig_407_760
Type: TC
Location: 826800 - 827705 (+)
Type: TC
Location: 826800 - 827705 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium lactatiformans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.