Cluster: B34.bin_1_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: B34.bin_1
- CGC Family ID: CGCFAM_04923
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B34_scaffold_3135 | B34_scaffold_3135_48 | 47159 | 48034 | + | GT2 |
| CAZyme | B34_scaffold_3135 | B34_scaffold_3135_49 | 48031 | 48981 | + | GT2 |
| CAZyme | B34_scaffold_3135 | B34_scaffold_3135_50 | 48971 | 49708 | + | GT2 |
| pfam | B34_scaffold_3135 | B34_scaffold_3135_51 | 49713 | 50096 | + | DUF2304 |
| pfam | B34_scaffold_3135 | B34_scaffold_3135_52 | 50187 | 50741 | + | dTDP_sugar_isom |
| TC | B34_scaffold_3135 | B34_scaffold_3135_53 | 50760 | 51575 | + | 3.A.1.104.1 |
| TC | B34_scaffold_3135 | B34_scaffold_3135_54 | 51713 | 53119 | + | 2.A.50.2.1 |
Gene ID: B34_scaffold_3135_48
Type: CAZyme
Location: 47159 - 48034 (+)
Type: CAZyme
Location: 47159 - 48034 (+)
Gene ID: B34_scaffold_3135_49
Type: CAZyme
Location: 48031 - 48981 (+)
Type: CAZyme
Location: 48031 - 48981 (+)
Gene ID: B34_scaffold_3135_50
Type: CAZyme
Location: 48971 - 49708 (+)
Type: CAZyme
Location: 48971 - 49708 (+)
Gene ID: B34_scaffold_3135_51
Type: pfam
Location: 49713 - 50096 (+)
Type: pfam
Location: 49713 - 50096 (+)
Gene ID: B34_scaffold_3135_52
Type: pfam
Location: 50187 - 50741 (+)
Type: pfam
Location: 50187 - 50741 (+)
Gene ID: B34_scaffold_3135_53
Type: TC
Location: 50760 - 51575 (+)
Type: TC
Location: 50760 - 51575 (+)
Gene ID: B34_scaffold_3135_54
Type: TC
Location: 51713 - 53119 (+)
Type: TC
Location: 51713 - 53119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea fessa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.