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Cluster: B34.bin_1_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B34_contig_855 B34_contig_855_1301 1438150 1439580 + 2.A.66.1.33
TC B34_contig_855 B34_contig_855_1302 1439780 1440490 + 1.A.14.2.2
CAZyme B34_contig_855 B34_contig_855_1303 1440906 1442504 + GH25
pfam B34_contig_855 B34_contig_855_1304 1443469 1444269 + OAD_gamma
TC B34_contig_855 B34_contig_855_1305 1444298 1444654 + 3.B.1.1.2
TC B34_contig_855 B34_contig_855_1306 1444718 1445869 + 3.B.1.1.3
Gene ID: B34_contig_855_1301
Type: TC
Location: 1438150 - 1439580 (+)
Gene ID: B34_contig_855_1302
Type: TC
Location: 1439780 - 1440490 (+)
Gene ID: B34_contig_855_1303
Type: CAZyme
Location: 1440906 - 1442504 (+)
Gene ID: B34_contig_855_1304
Type: pfam
Location: 1443469 - 1444269 (+)
Gene ID: B34_contig_855_1305
Type: TC
Location: 1444298 - 1444654 (+)
Gene ID: B34_contig_855_1306
Type: TC
Location: 1444718 - 1445869 (+)

Taxonomic Lineage

Domain
Bacteria
Genus
Otoolea

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B34_contig_855_1306 vegan > omnivore 1.18114 0.03201

🧭 Explore Read Mapping of CGC

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